Sequence of DPV Potato mop-top virus
Potato mop-top virus cprt gene for cp readthrough protein, genomic RNA, isolate 75
ACC No: AM503633
Dated: 2009-03-23 | Length: 2478 | CRC: 969572253
ID AM503633; SV 1; linear; genomic RNA; STD; VRL; 2478 BP.
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AC AM503633;
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DT 23-MAR-2009 (Rel. 100, Created)
DT 23-MAR-2009 (Rel. 100, Last updated, Version 1)
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DE Potato mop-top virus cprt gene for cp readthrough protein, genomic RNA,
DE isolate 75
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KW cp readthrough protein; cprt gene.
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OS Potato mop-top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
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RN [1]
RP 1-2478
RA Aura J.M.;
RT ;
RL Submitted (21-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL Aura J.M., Department of Applied Biology, University of Helsinki, PO Box
RL 27, 00014 Helsinki, FINLAND.
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RN [2]
RA Latvala-Kilby S., Aura J.M., Pupola N., Hannukkala A., Valkonen J.P.T.;
RT "Genetic variability of Potato mop-top virus in Finland and Latvia";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2478
FT /organism="Potato mop-top virus"
FT /isolate="75"
FT /mol_type="genomic RNA"
FT /country="Latvia"
FT /db_xref="taxon:37128"
FT CDS 1. .2478
FT /codon_start=1
FT /transl_except=(pos:529. .531,aa:OTHER)
FT /gene="cprt"
FT /product="cp readthrough protein"
FT /note="read through stop codon"
FT /protein_id="CAM78314.1"
FT /translation="MAENRGERRAAVENRYDSWDHEQAMKAAVRKFISYDQFSAQLRNW
FT REARLNIIEHATSVLSQVSNLGRTHFYSRTERFGGSSLVGDKLYVCLNETRMKTALNNI
FT IVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQD
FT KYELVNGLRWAGAXQLTAQAFWFDVNAAIDEIDNRLLAAAALRLLPGQANHVDGLVSIN
FT YAQLDRALSVVGGNILPQTLEITRDERKRQLHEVRVIDGERVTIRNKDEATVIRNHGQG
FT LPWLLAFLLLLLSVVVVYSTIYLNDWLYRLSVVRHGKPGGGAARKLSGMSDWLCSRLRA
FT RGALNVSRMRKKQACDPSPTGLRKFLTCYNFSYELWDPTGSYDDAQRRIIAEQNSFVEA
FT VRAIDEGDRELAEACLTNVRRILRRHLNYRPDYFDIIEAKAVYLVTVLTNAMSGPVVGV
FT DDDERRAVVAAFNPSDCGLPNLDSCSLDEIKNFDLSEVAIGEGTNVEQARGYLNLCRNI
FT QCMIETIGTVQFLGVLSSYTGPQYPCISQAFAEDKRIRKERLKDKDNITTADIIAYLVS
FT GVMAAYALVAVSKGGITLFKFMKNYAGGGGDGPGSSRRIRHLEAALPSVPQPEELTMME
FT RLRRLQSSDNDLVLRRNPSDMLSQVVRDVVADVDSSDIAEFLNDPARMTEAALELGLAR
FT IMSAEGSPVDVIEPGGQELISMQVHGESLTVINAGTDSPTVIRSASLSTRHRSSGIEIG
FT SFAVDKVLPYEVEGENDDHGDAGKKPTVAQALMIGGGAVKGQGNLGVTNGKELLKVLGS
FT SRSIGKMSGKMAV"
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SQ Sequence 2478 BP; 657 A; 440 C; 723 G; 658 T; 0 other;
am503633 Length: 2478 23-MAR-2009 Type: N Check: 3641 ..
1 atggctgaaa acagaggtga gcgaagagca gccgtcgaga atagatatga
51 ctcttgggac catgagcagg ccatgaaggc tgccgtgagg aagtttattt
101 cttacgatca attctcagct cagttaagaa actggcgcga agctaggtta
151 aacataattg aacatgccac tagcgtgttg agccaggtgt ctaatttagg
201 tagaactcat ttctacagta gaaccgaacg ctttggtgga agttcacttg
251 ttggtgataa attgtacgta tgtctgaatg aaaccagaat gaaaaccgcg
301 ttgaataata taattgtagc gttgcagaca gtgaacggcg aagggcgggc
351 aagacgatta ggtccgagag aagcttccgc gaacaccggc ggggaggata
401 gcgctctgaa tgtggcacat caactcgcag aggtggacga tttattaact
451 gatgaaagtt ttttaagaga agctgttttt actcaggaca aatatgagct
501 cgtgaacggg ttacgctggg ctggtgcata gcaattaacc gctcaggctt
551 tttggtttga cgtcaacgcc gctatcgacg aaattgataa tcgactgctg
601 gcggcggctg cgttaagact attgcctggg caggcaaatc acgtggatgg
651 tttagtgtct ataaattacg cacaattgga tagagcattg agtgttgttg
701 gtgggaatat tttacctcaa acgttggaga taactcgtga cgaaagaaaa
751 aggcaattac atgaggtcag agttatcgac ggcgagcgtg tcactattcg
801 taacaaggat gaggcgacgg tcattaggaa tcatggtcag ggacttcctt
851 ggctattagc gtttttactg ttgctgttat ctgttgtagt ggtgtattct
901 acaatatacc tgaacgactg gttgtatcgg ttaagtgtgg taaggcatgg
951 gaaacctggc ggtggtgcag ctcgtaagct gtcgggtatg tcggactggt
1001 tgtgcagtcg cttaagggcc agaggcgctt tgaatgtgag taggatgagg
1051 aagaaacaag catgcgatcc gtcgcccact gggttgcgga agttccttac
1101 ttgttataac ttttcttatg aactttggga tcctactggt agttatgacg
1151 atgcgcagcg gagaattata gcggaacaga attcgtttgt ggaagccgtg
1201 agggccatag atgaaggtga cagggagttg gctgaggcgt gtttgactaa
1251 tgttagacgg atcctcagga gacatcttaa ttaccgacct gattattttg
1301 atattattga agcgaaggcg gtatatttgg tgacagtgct gacaaacgca
1351 atgtcggggc cagttgttgg cgttgacgat gacgagcgga gagcggtggt
1401 agccgcgttt aatccgtcag actgtgggtt accgaatttg gatagttgct
1451 ctttggacga aattaagaat tttgatttgt ccgaagtggc gatcggtgag
1501 ggtaccaatg ttgaacaagc aagagggtat cttaatcttt gtagaaatat
1551 tcagtgtatg attgagacaa ttggcaccgt ccaatttctt ggtgtgttgt
1601 cgtcgtatac aggtcctcag tatccttgta tatcccaagc ttttgctgaa
1651 gataagagga taagaaaaga aaggctgaaa gataaggaca atataacgac
1701 agcagatatt attgcctatt tggtgagtgg ggtgatggca gcctacgctc
1751 ttgtggcggt aagtaaagga gggatcacac tgtttaagtt tatgaagaac
1801 tatgcgggtg gaggtggtga cgggcctggt tcaagcagaa gaataagaca
1851 tttagaggcc gctttgccct ccgttccgca gccagaagaa ttgaccatga
1901 tggaacgttt gagaagactt caatcttccg ataacgattt agttttgaga
1951 aggaacccgt ccgatatgct tagtcaggtc gtacgtgacg ttgtagccga
2001 tgtagactcc agcgatattg ctgagttttt gaatgatcct gctaggatga
2051 ccgaagcggc tctggagctc ggattggcca gaataatgag tgctgaaggt
2101 tcaccggtgg atgtaattga gccagggggc caggaactta tttccatgca
2151 agtgcatgga gaaagtctaa ccgtcataaa tgccggcacc gactctccca
2201 cagtgatcag atccgcgtcc ttgtcgacgc ggcaccgtag ttctggtata
2251 gaaatcggtt cttttgcagt ggataaagtg ctgccttacg aggtggaagg
2301 cgaaaacgac gatcacggtg acgccggtaa gaagcccact gtcgcccaag
2351 ctttgatgat tgggggtggt gcggttaagg gacagggtaa tctgggtgtt
2401 actaatggca aagaactctt gaaggtatta ggtagctctc gatctatagg
2451 gaagatgtca ggtaagatgg ctgtttaa