Sequence of DPV Cotton leaf curl Burewala virus
Cotton leaf curl virus-[Burewala] DNA A, complete sequence, clone LA 7
ACC No: AM774297
Dated: 2010-08-11 | Length: 2759 | CRC: -1767971702
ID AM774297; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC AM774297; XX DT 07-JAN-2010 (Rel. 103, Created) DT 11-AUG-2010 (Rel. 105, Last updated, Version 2) XX DE Cotton leaf curl virus-[Burewala] DNA A, complete sequence, clone LA 7 XX KW AC1 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; C4 protein; Coat protein; KW pre-coat protein; replication associated protein; KW replication enhancer protein. XX OS Cotton leaf curl Burewala virus - [India:Vehari:2006] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2759 RA Amrao L.; RT ; RL Submitted (24-JUL-2007) to the EMBL/GenBank/DDBJ databases. RL Amrao L., Plant Biotehnology Division, NIBGE, Jhang Road, Faisalabad, P.O. RL Box 577, PAKISTAN. XX RN [2] RA Amrao L., Amin I., Shahid M.S., Briddon R.W., Mansoor S.; RT "Cotton leaf curl disease in resistant cotton is associated with a single RT begomovirus that lacks an intact transcriptional activator protein"; RL Virus Res. 152(1-2):153-163(2010). XX FH Key Location/Qualifiers FH FT source 1. .2759 FT /organism="Cotton leaf curl Burewala virus - FT [India:Vehari:2006]" FT /mol_type="genomic DNA" FT /country="Pakistan:Rahim Yar Khan" FT /collected_by="Luqman Amrao" FT /collection_date="Jun-2004" FT /clone="LA 7" FT /tissue_type="leaf" FT /db_xref="taxon:418448" FT CDS 132. .488 FT /transl_table=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:D2N211" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2N211" FT /protein_id="CAO85773.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQIKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS 292. .1062 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D2N212" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D2N212" FT /protein_id="CAO85774.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKSKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1059. .1463) FT /transl_table=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2N213" FT /protein_id="CAO85775.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQLVVFVDQSSSIKLNIY" FT CDS complement(1505. .2596) FT /transl_table=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:D2N214" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="UniProtKB/TrEMBL:D2N214" FT /protein_id="CAO85776.1" FT /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKLSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALKVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNSGPNSSYKEFLNEEKNTALKNWALKNAIFITLEGPL FT YSASNQSTAQGSKETQQEEESRY" FT CDS complement(2308. .2682) FT /transl_table=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2N215" FT /protein_id="CAO85777.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSARITDS FT STWYPQPGQHISIRTFRELN" XX SQ Sequence 2759 BP; 722 A; 541 C; 643 G; 853 T; 0 other; am774297 Length: 2759 11-AUG-2010 Type: N Check: 4318 .. 1 accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg 51 gccaatcata tgacgcgctc aaagcttaaa taattctccc gcttattata 101 agtacttcgt tgctaagtat gcgtttgaaa aatgtgggat ccactgttaa 151 atgagttccc cgacaccgtt cacggtttta ggtgtatgtt agcagttaaa 201 tatttgcagt tagtagagaa aacttactct cctgatacat tgggttacga 251 tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 301 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgccg 351 tctcaacttc gacagcccat atgtgagccg tgctgctgcc cccattgtcc 401 gcgtcaccaa atcaaaagca tgggcgaaca ggcccatgaa cagaaagccc 451 aggatgtaca ggatgtacag aagtccagat gttcctagag gatgtgaagg 501 tccatgtaag gttcagtcat ttgagtccag acatgatatt cagcatatag 551 gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 601 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat 651 ctggatggat gagaacatta agacgaagaa tcacacgaat agtgtgatgt 701 ttttcttggt tagagatcgt agacctgttg ataaacctca agattttgga 751 gaggtattta atatgtttga taatgagccc agtacggcga ctgtgaagaa 801 tgttcatcgt gataggtatc aagttctgcg caaatggtat gcaactgtca 851 ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 901 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga 951 gaatcattct gagaatgctt taatgttgta tatggcgtgt actcacgcct 1001 ctaacccagt gtatgctacc ttgaagatac ggatctactt ctatgattcc 1051 gtgacaaatt aataaatatt taattttatt gaagatgatt ggtctacaaa 1101 tacaacaagt tgtaatacat tccataatac atgatcaact gctctaacta 1151 cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1201 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca 1251 gattcggaaa gctatgaaac atttgtgtat ccccaacgct ttcctcaggt 1301 tgtgattgaa ctggatcctg atcgtgagta tatccatatt cgtcgtgaat 1351 ggacggttga cgtggctgat gatcttgaaa tagaggggat ttggaacttc 1401 ccagatatat gcgccattcc ctgcttgagc tgcagtgatg ggttcccctg 1451 tgcgtgaatc catggttgtg gcagttgatt gacagataat aagaacattc 1501 tcattcaata tctactctcc tcctcctgtt gcgtctcttt gcttccctgt 1551 gctgtacttt gattggaagc tgagtacagt ggtccttcga gagtgatgaa 1601 gattgcattt tttaaggccc aattctttaa tgctgtgttt ttttcctcgt 1651 tgaggaattc cttataactg ctgttcggac cagaattgca taggaagatt 1701 gtcggtatcc cgcctttaat ttgaactggc tttccgtatt ttgtgttgga 1751 ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1801 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact 1851 ttgggactca ggtccagatg tccgcacaaa tagttatgtg gtcccaatga 1901 tctagcccac atcgtcttcc ccgttcgact atctccctca attactatac 1951 tccgaggtct aaggggccgc gcagcggcat cgacaacgtt atcgatggcc 2001 caaacttcaa gttcttctgg aacttgatcg aaagaagaag gagaaaaagg 2051 agaaatatag ggagccggtg gctcctgaaa gattctgtct agatttgcat 2101 ttaaattatg aaattgtagt acaaaatctt taggagctag ttccttaatg 2151 actttaagag cctctgactt actgcctgcg ttaagtgctg cggcgtaagc 2201 gtcgttggct gtctgctgtc ctcctcttgc tgatcttcca tcgatctgaa 2251 actctcccca ctcgagagtg tccccgtcct tgtcgatgta ggccttgaca 2301 tctgagctta atttagctcc ctgaatgttc ggatggaaat gtgctgacct 2351 ggttggggat accaggtcga agaatctgtt attcgtgcag acgaatttgc 2401 cctcgaactg gatgagcaca tggagatgag ggctcccatc ttcgtgtaac 2451 tctctgcaga gtttgatgta ttttttattc gagggtgtgt tgatggcttg 2501 aatttgggaa agtgcttcct ctttagtgag tgagcactgt ggataagtga 2551 tgaaataatt tttggcttgt actttaaaac gtttgggggg agccattgac 2601 tttggtcaat tagagacaac tgatgggctt ttactctagg aattggagac 2651 tggatacaat ttatagtgtc tccaaatggc atattctgta aataactaga 2701 agtttgtttg aaattcaaat tcccctttgg gctccaaaag cggccatccg 2751 tataatatt