Sequence of DPV Tomato mottle leaf curl virus
Tomato mottle leaf curl virus isolate PE-Pt5 replication-associated protein (AC1) gene, partial cds; and putative AC4 protein (AC4) and capsid protein (AV1) genes, complete cds.
ACC No: AY049222
Dated: 2005-04-16 | Length: 1935 | CRC: 691813538
!!NA_SEQUENCE 1.0
ID AY049222 standard; genomic DNA; VRL; 1935 BP.
XX
AC AY049222;
XX
SV AY049222.1
XX
DT 06-MAR-2002 (Rel. 71, Created)
DT 16-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Tomato mottle leaf curl virus isolate PE-Pt5 replication-associated protein
DE (AC1) gene, partial cds; and putative AC4 protein (AC4) and capsid protein
DE (AV1) genes, complete cds.
XX
KW .
XX
OS Tomato mottle leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-1935
RX DOI; 10.1007/s00705-002-0917-0.
RX MEDLINE; 22444046.
RX PUBMED; 12556993.
RA Ribeiro S.G., Ambrozevicius L.P., Avila A.C., Bezerra I.C., Calegario R.F.,
RA Fernandes J.J., Lima M.F., de Mello R.N., Rocha H., Zerbini F.M.;
RT "Distribution and genetic diversity of tomato-infecting begomoviruses in
RT Brazil";
RL Arch. Virol. 148(2):281-295(2003).
XX
RN [2]
RP 1-1935
RA Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F.,
RA Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.;
RT ;
RL Submitted (31-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H.
RL Rolfs s/n, Vicosa, MG 36571-000, Brazil
XX
FH Key Location/Qualifiers
FH
FT source 1. .1935
FT /db_xref="taxon:172394"
FT /mol_type="genomic DNA"
FT /note="acronym: TMoLCV"
FT /organism="Tomato mottle leaf curl virus"
FT /isolate="PE-Pt5"
FT CDS complement(<1. .695)
FT /codon_start=1
FT /db_xref="GOA:Q8QPR0"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q8QPR0"
FT /note="Rep"
FT /gene="AC1"
FT /product="replication-associated protein"
FT /protein_id="AAL82875.1"
FT /translation="MPLPRRFRIHSKNYFLTYSKCSLQKEEALSQLLGLQTPVNKLFVR
FT VARELHEDGEPHLHVLIQFEGKLQCTNERLFDLISPTRSAHFHPNVQGAKSSSDVKSYV
FT EKDGDFIDHGVFQIDGRSARGGQQSANDTYAKVLNAGSVMEALNILREEQPKDFVLQHH
FT NIRSNLERIFQKAPEQWVPPFPLSSFTEVPEEMQEWADDYFGGDPAARPERPISIIIEG
FT DSRTGKTMWA"
FT CDS complement(245. .538)
FT /codon_start=1
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q8QHR3"
FT /gene="AC4"
FT /product="putative AC4 protein"
FT /protein_id="AAL82876.1"
FT /translation="MGNLISTCSSSSKGNYSAQTNDCSTSYPQPDQHISIRTFRELKAH
FT QMSNPTWRKTETSLIMEFSRSTADQLEEVSNLPTTRMPRSSTQDPSWRPSIY"
FT CDS 1043. .1798
FT /codon_start=1
FT /db_xref="GOA:Q8QPQ9"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q8QPQ9"
FT /note="CP"
FT /gene="AV1"
FT /product="capsid protein"
FT /protein_id="AAL82874.1"
FT /translation="MPKRDAPWRSMAGTSKVSRSANFSPRGGIGSKSEKAQAWVNRPMY
FT RKPRIYRMYRTPDVPKGCEGPCKVQSFEQRHDVSHTGKVMCISDVTRGNGITHRVGKRF
FT CVKSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRYQVLHRFYAKVTGGQYASNKQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ Sequence 1935 BP; 526 A; 412 C; 438 G; 559 T; 0 other;
AY049222 Length: 1935 April 19, 2005 08:57 Type: N Check: 5722 ..
1 gcccacattg tctttcctgt cctcgaatca ccctcgatga ttatactaat
51 aggtctctcc ggccgcgcag cgggatcccc accaaaataa tcatccgccc
101 actcttgcat ctcctccgga acctcagtaa aggaggagag gggaaacgga
151 ggaacccatt gttccggagc cttttgaaag atgcgttcta aattagaacg
201 gatgttgtga tgttgaagga cgaagtcctt cggttgctcc tccctcaata
251 tattgagggc ctccatgacg gatcctgcgt tgaggacctt ggcatacgtg
301 tcgttggcag attgctgacc tcctctagct gatctgccgt cgatctggaa
351 aactccatga tcaatgaagt ctccgtcttt ctccacgtag gatttgacat
401 ctgatgagct tttagctccc tgaacgttcg gatggaaatg tgctgatctg
451 gttggggata tgaggtcgaa caatcgttcg tttgtgcact gtaatttccc
501 ttcgaactgg atgagcacgt ggagatgagg ttccccatct tcgtgtaatt
551 ctctggcaac tcggacgaac aatttattaa ctggcgtctg taaccctaat
601 aattgagata gagcttcttc cttttgtaaa gagcactttg aataagtaag
651 gaaataattt ttagagtgga ttctaaaacg acgtggtaat ggcatttttg
701 taattaaggc gtgtacacca attgagttct ctctaaaact ctatggcaat
751 cggtgtattg gggtacaata tatactagaa gcccctatag aactcttaat
801 catagtcaca cacgtggcgg ccatccgtat aatattaccg gatggccgcg
851 cgggtttttt ttgacccgct ccgtgatgtg ttttttgtct tttactatgt
901 ggtccagtca ataaatgaca aatatgaccg tccaatcaga aatggtcctc
951 aaagcctaat tatttaaaaa tacttggtca ctaagtttgg taaagtttat
1001 aaatggtcct tcctcgtaat gttataccaa ctttaagtca taatgcctaa
1051 gcgtgatgcc ccatggcgct caatggcggg gacctcaaag gttagccgct
1101 ctgcaaattt ctctcctcgt ggaggaattg ggtcgaaatc agaaaaggcc
1151 caagcctggg ttaacaggcc catgtatagg aagcccagga tatatcggat
1201 gtatagaact cccgatgtac caaagggctg tgaaggccca tgtaaggtcc
1251 aatccttcga gcagcgtcat gatgtctctc atactgggaa ggtgatgtgt
1301 atttccgatg tcactcgtgg taacggtatt acccaccgtg tgggtaaacg
1351 tttttgtgtc aagtcagtgt atatattagg caaggtctgg atggatgaca
1401 acatcaagtt gaagaaccac acgaatagtg tgatgttctg gttagttagg
1451 gataggagac cgtatggcac gcccatggat tttggccagg tgttcaacat
1501 gtttgacaac gagcccagta ctgccaccgt gaagaacgat ctccgcgatc
1551 gttaccaggt cctgcacagg ttctatgcca aggttacagg tggacaatac
1601 gccagcaaca agcaggctat tgtcaagagg ttctggaagg tcaacaacca
1651 tgtggtgtac aaccatcagg aggcagggaa atacgagaac catacggaga
1701 acgctctatt attgtatatg gcatgtactc atgcctctaa tcctgtatat
1751 gctactttaa aaattcggat ctatttttat gattcgataa caaattaata
1801 aactttaaat tttattgaat gatcttctag tacatagttt acatatggtt
1851 tatctgttgc gtatcgaaca gctctaatta cattgttaat tgaaataact
1901 cctaatcgat acaaataaat attaactaaa tccat