Sequence of DPV Tomato mottle leaf curl virus
Tomato mottle leaf curl virus isolate PE-Pt5 replication-associated protein (AC1) gene, partial cds; and putative AC4 protein (AC4) and capsid protein (AV1) genes, complete cds.
ACC No: AY049222
Dated: 2005-04-16 | Length: 1935 | CRC: 691813538
!!NA_SEQUENCE 1.0 ID AY049222 standard; genomic DNA; VRL; 1935 BP. XX AC AY049222; XX SV AY049222.1 XX DT 06-MAR-2002 (Rel. 71, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Tomato mottle leaf curl virus isolate PE-Pt5 replication-associated protein DE (AC1) gene, partial cds; and putative AC4 protein (AC4) and capsid protein DE (AV1) genes, complete cds. XX KW . XX OS Tomato mottle leaf curl virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1935 RX DOI; 10.1007/s00705-002-0917-0. RX MEDLINE; 22444046. RX PUBMED; 12556993. RA Ribeiro S.G., Ambrozevicius L.P., Avila A.C., Bezerra I.C., Calegario R.F., RA Fernandes J.J., Lima M.F., de Mello R.N., Rocha H., Zerbini F.M.; RT "Distribution and genetic diversity of tomato-infecting begomoviruses in RT Brazil"; RL Arch. Virol. 148(2):281-295(2003). XX RN [2] RP 1-1935 RA Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F., RA Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.; RT ; RL Submitted (31-JUL-2001) to the EMBL/GenBank/DDBJ databases. RL Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. RL Rolfs s/n, Vicosa, MG 36571-000, Brazil XX FH Key Location/Qualifiers FH FT source 1. .1935 FT /db_xref="taxon:172394" FT /mol_type="genomic DNA" FT /note="acronym: TMoLCV" FT /organism="Tomato mottle leaf curl virus" FT /isolate="PE-Pt5" FT CDS complement(<1. .695) FT /codon_start=1 FT /db_xref="GOA:Q8QPR0" FT /db_xref="HSSP:1L5I" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="UniProt/TrEMBL:Q8QPR0" FT /note="Rep" FT /gene="AC1" FT /product="replication-associated protein" FT /protein_id="AAL82875.1" FT /translation="MPLPRRFRIHSKNYFLTYSKCSLQKEEALSQLLGLQTPVNKLFVR FT VARELHEDGEPHLHVLIQFEGKLQCTNERLFDLISPTRSAHFHPNVQGAKSSSDVKSYV FT EKDGDFIDHGVFQIDGRSARGGQQSANDTYAKVLNAGSVMEALNILREEQPKDFVLQHH FT NIRSNLERIFQKAPEQWVPPFPLSSFTEVPEEMQEWADDYFGGDPAARPERPISIIIEG FT DSRTGKTMWA" FT CDS complement(245. .538) FT /codon_start=1 FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProt/TrEMBL:Q8QHR3" FT /gene="AC4" FT /product="putative AC4 protein" FT /protein_id="AAL82876.1" FT /translation="MGNLISTCSSSSKGNYSAQTNDCSTSYPQPDQHISIRTFRELKAH FT QMSNPTWRKTETSLIMEFSRSTADQLEEVSNLPTTRMPRSSTQDPSWRPSIY" FT CDS 1043. .1798 FT /codon_start=1 FT /db_xref="GOA:Q8QPQ9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProt/TrEMBL:Q8QPQ9" FT /note="CP" FT /gene="AV1" FT /product="capsid protein" FT /protein_id="AAL82874.1" FT /translation="MPKRDAPWRSMAGTSKVSRSANFSPRGGIGSKSEKAQAWVNRPMY FT RKPRIYRMYRTPDVPKGCEGPCKVQSFEQRHDVSHTGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVLHRFYAKVTGGQYASNKQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" XX SQ Sequence 1935 BP; 526 A; 412 C; 438 G; 559 T; 0 other; AY049222 Length: 1935 April 19, 2005 08:57 Type: N Check: 5722 .. 1 gcccacattg tctttcctgt cctcgaatca ccctcgatga ttatactaat 51 aggtctctcc ggccgcgcag cgggatcccc accaaaataa tcatccgccc 101 actcttgcat ctcctccgga acctcagtaa aggaggagag gggaaacgga 151 ggaacccatt gttccggagc cttttgaaag atgcgttcta aattagaacg 201 gatgttgtga tgttgaagga cgaagtcctt cggttgctcc tccctcaata 251 tattgagggc ctccatgacg gatcctgcgt tgaggacctt ggcatacgtg 301 tcgttggcag attgctgacc tcctctagct gatctgccgt cgatctggaa 351 aactccatga tcaatgaagt ctccgtcttt ctccacgtag gatttgacat 401 ctgatgagct tttagctccc tgaacgttcg gatggaaatg tgctgatctg 451 gttggggata tgaggtcgaa caatcgttcg tttgtgcact gtaatttccc 501 ttcgaactgg atgagcacgt ggagatgagg ttccccatct tcgtgtaatt 551 ctctggcaac tcggacgaac aatttattaa ctggcgtctg taaccctaat 601 aattgagata gagcttcttc cttttgtaaa gagcactttg aataagtaag 651 gaaataattt ttagagtgga ttctaaaacg acgtggtaat ggcatttttg 701 taattaaggc gtgtacacca attgagttct ctctaaaact ctatggcaat 751 cggtgtattg gggtacaata tatactagaa gcccctatag aactcttaat 801 catagtcaca cacgtggcgg ccatccgtat aatattaccg gatggccgcg 851 cgggtttttt ttgacccgct ccgtgatgtg ttttttgtct tttactatgt 901 ggtccagtca ataaatgaca aatatgaccg tccaatcaga aatggtcctc 951 aaagcctaat tatttaaaaa tacttggtca ctaagtttgg taaagtttat 1001 aaatggtcct tcctcgtaat gttataccaa ctttaagtca taatgcctaa 1051 gcgtgatgcc ccatggcgct caatggcggg gacctcaaag gttagccgct 1101 ctgcaaattt ctctcctcgt ggaggaattg ggtcgaaatc agaaaaggcc 1151 caagcctggg ttaacaggcc catgtatagg aagcccagga tatatcggat 1201 gtatagaact cccgatgtac caaagggctg tgaaggccca tgtaaggtcc 1251 aatccttcga gcagcgtcat gatgtctctc atactgggaa ggtgatgtgt 1301 atttccgatg tcactcgtgg taacggtatt acccaccgtg tgggtaaacg 1351 tttttgtgtc aagtcagtgt atatattagg caaggtctgg atggatgaca 1401 acatcaagtt gaagaaccac acgaatagtg tgatgttctg gttagttagg 1451 gataggagac cgtatggcac gcccatggat tttggccagg tgttcaacat 1501 gtttgacaac gagcccagta ctgccaccgt gaagaacgat ctccgcgatc 1551 gttaccaggt cctgcacagg ttctatgcca aggttacagg tggacaatac 1601 gccagcaaca agcaggctat tgtcaagagg ttctggaagg tcaacaacca 1651 tgtggtgtac aaccatcagg aggcagggaa atacgagaac catacggaga 1701 acgctctatt attgtatatg gcatgtactc atgcctctaa tcctgtatat 1751 gctactttaa aaattcggat ctatttttat gattcgataa caaattaata 1801 aactttaaat tttattgaat gatcttctag tacatagttt acatatggtt 1851 tatctgttgc gtatcgaaca gctctaatta cattgttaat tgaaataact 1901 cctaatcgat acaaataaat attaactaaa tccat