Sequence of DPV Eggplant mottled crinkle virus
Pear latent virus 33 kDa RNA polymerase pre-readthrough protein, 92 kDa RNA polymerase, coat protein CP, 22 kDa movement protein, and 19 kDa symptom severity modulator genes, complete cds.
ACC No: AY100482
Dated: 2005-04-16 | Length: 4766 | CRC: 882513922
!!NA_SEQUENCE 1.0 ID AY100482 standard; genomic RNA; VRL; 4766 BP. XX AC AY100482; XX SV AY100482.1 XX DT 16-JUN-2002 (Rel. 72, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Pear latent virus 33 kDa RNA polymerase pre-readthrough protein, 92 kDa RNA DE polymerase, coat protein CP, 22 kDa movement protein, and 19 kDa symptom DE severity modulator genes, complete cds. XX KW . XX OS Pear latent virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Tombusvirus. XX RN [1] RP 1-4766 RA Russo M., Vovlas C., Rubino L., Grieco F., Martelli G.P.; RT "Molecular characterization of a tombusvirus isolated from diseased pear RT trees in southern Italy"; RL J. Plant Pathol. 84:161-166(2002). XX RN [2] RP 1-4766 RA Russo M.; RT ; RL Submitted (30-APR-2002) to the EMBL/GenBank/DDBJ databases. RL Istituto di Virologia Vegetale-Sezione di Bari, Consiglio Nazionale Delle RL Ricerche, Via Amendola 165/A, Bari 70126, Italy XX FH Key Location/Qualifiers FH FT source 1. .4766 FT /db_xref="taxon:197112" FT /mol_type="genomic RNA" FT /organism="Pear latent virus" FT CDS 167. .2623 FT /codon_start=1 FT /db_xref="GOA:Q8JMT5" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR007095" FT /db_xref="UniProt/TrEMBL:Q8JMT5" FT /transl_except=(pos:1055. .1057,aa:Glx) FT /product="92 kDa RNA polymerase" FT /protein_id="AAM49803.1" FT /translation="MDRLLNFLRPKRELFVGDFAIGVDRRPSVDMFQLVCRLALRYMRT FT GKIECNVDSLQQFVVELLKTDCAAKWEWFMKRRSAGDYAIPLALAALPIAPLLSYTTKV FT RTVSVKAFGNELTFPFRTLRPSLPRKGLLLRLAAGFALAPVCLLAVYATLPREKLSVFR FT LRTEARTHMEDEREATECLVVEPARELKGKDGEDLLTGSRMTKVIASTGRPRRRPYAAK FT VAQVARAKVGYLKNSPENRLIYQRVIIEIMDKDCVRYIDRDVILPLAIGCCFVYPDGVE FT ESAALWGSSESLGVKZGGLVRLPGVVTQTNRDIPSGVLLPQEVLEVRTGPPNAKDRNIF FT MVAGCPSQARFLVHNHCLKNLKRGLVERVFCVEKNGILTRTPQPAKGAFSRLSPFRKAV FT CEKVGVAHRFGYDGFLSYYNGAKLRTYTRAVESLHISPVCERDSHLTTFVKAEKISTSK FT GDPAPRVIQPRNPRYNVELGRYLRHMESKLMKAVDGVFGETTCIKGYTADEVGQIFRDK FT WDKFDRPVAIGLDASRFDQHCSVEALQFEHSFYRAMYPGNKLLSKLLEWQLHNKGKGYV FT PDGTITYRKEGCRMSGDINTSLGNYLLMCAMIYGYMRHLGINEFSLANCGDDCVLIVER FT KHLKRIQGTLPEYFLNLGYTMKVEPPVFQLEEVEFCQAHPVQFEGGWKMVRNVRTAMSK FT DVHCVNNIKDLATRKAWSNAQHHGGIALSAGIPVVEKFYSRFALYEMPKRHQRIDTVTN FT VHKWRGSGGKYSVTPESRASFWQAFGLTGDEQLALEDRLDRWEMDLFGEEGVDAHEPSI FT LDSAVA" FT CDS 167. .1057 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q8JMT4" FT /product="33 kDa RNA polymerase pre-readthrough protein" FT /protein_id="AAM49802.1" FT /translation="MDRLLNFLRPKRELFVGDFAIGVDRRPSVDMFQLVCRLALRYMRT FT GKIECNVDSLQQFVVELLKTDCAAKWEWFMKRRSAGDYAIPLALAALPIAPLLSYTTKV FT RTVSVKAFGNELTFPFRTLRPSLPRKGLLLRLAAGFALAPVCLLAVYATLPREKLSVFR FT LRTEARTHMEDEREATECLVVEPARELKGKDGEDLLTGSRMTKVIASTGRPRRRPYAAK FT VAQVARAKVGYLKNSPENRLIYQRVIIEIMDKDCVRYIDRDVILPLAIGCCFVYPDGVE FT ESAALWGSSESLGVK" FT CDS 2649. .3815 FT /codon_start=1 FT /db_xref="GOA:Q8JMT3" FT /db_xref="HSSP:2TBV" FT /db_xref="InterPro:IPR000937" FT /db_xref="UniProt/TrEMBL:Q8JMT3" FT /product="coat protein CP" FT /protein_id="AAM49804.1" FT /translation="MEIVRRNNNSAIAINKKQLATMAATAAAGALSNYVKNNGAMVVQG FT AVNMGKKAYGAVRNRKNKGNSQAMVHVGGMGGAMMAPVAVSRQLVGSKPKFAGRTAGSV FT TVTHREYLTQVNNSSAFTTNGGIVGNLLQLNPLNGTLFSWLPAIASNFDQYVFNSVVLH FT YVPLCGTNEVGRVAMYWDKDSEDPEPADRVELANFGILKETAPWAEAILRVPTDKMKRY FT CDDSTVVDRKLIDLGQLGISTYGGTGTNPVGDVFVSYSVTLYFPQPTNTLLSTRQLSLT FT GALEASTGPGYINVTRTPTLLTITFRSTGTFLLSGVFRDTGVAVLGVTGGIGINSQTTL FT DVVGVATSFLVNCTVSTLPATLTYGSAGITSVTANCTRATRANTVTLL" FT CDS 3847. .4422 FT /codon_start=1 FT /db_xref="GOA:Q8JMT2" FT /db_xref="InterPro:IPR005332" FT /db_xref="UniProt/TrEMBL:Q8JMT2" FT /product="22 kDa movement protein" FT /protein_id="AAM49805.1" FT /translation="MDTEYEQVNKPWSELYKEATLGNKLTVNVGMEDVEVPLLPSNFLT FT KVRVSLSGGYITVRRVRIKIIPLVSRKAGVSGKLYLRDISDTTGRKLHCTELLDLGKEI FT RLTMQHLDFSVSARSDVPIVFGFEDLVSPFLEGRELFSVSLRWQFGLSAQCYSLPPAKW FT KVMYQEEALKALKPSKKKASKTDSSRLE" FT CDS 3879. .4397 FT /codon_start=1 FT /db_xref="GOA:Q8JMT1" FT /db_xref="HSSP:1R9F" FT /db_xref="InterPro:IPR004905" FT /db_xref="UniProt/Swiss-Prot:Q8JMT1" FT /product="19 kDa symptom severity modulator" FT /protein_id="AAM49806.1" FT /translation="MERAIQGSDAREQAYSERWDGGCGGTITPFKLPDESPSLIEWRLH FT NSEESEDKDNPLGFKESWSFGKVVFKRYLRYDGTEASLHRALGSWERDTVNNAASRFLG FT FGQIGCTYCIRFRGSCLTISGGSRTLQRLIEMAIRTKRTMLQLTPCEVEGNVSRGSPEG FT TEAFKEESE" XX SQ Sequence 4766 BP; 1237 A; 1003 C; 1315 G; 1211 T; 0 other; AY100482 Length: 4766 April 19, 2005 08:53 Type: N Check: 1953 .. 1 agaaattcct cagatttctc cctgttgacc aggagttatc ggtgagttgc 51 gctttgtgct ttgcgtaagg gatttctctc gtacaggtac gatctcggac 101 cagctacggg tttgaagggt gagcctattc ttcggaaggg taaattgtaa 151 ctttcaccaa taagcaatgg atagattact gaactttctg agacctaaga 201 gagaactttt cgtaggtgat tttgcgatcg gggttgacag gaggccatcg 251 gtggacatgt tccagttggt gtgcaggttg gctctcagat atatgaggac 301 agggaaaatc gagtgcaatg tggacagtct tcaacagttc gttgttgagt 351 tgttaaagac tgattgcgca gccaaatggg aatggttcat gaaacggcgt 401 tctgccggtg attatgctat cccccttgca ctggctgcac tacccattgc 451 cccgctgttg agttatacca caaaggttag aacggtgagt gtaaaggcgt 501 tcgggaatga attgactttc ccattcagga cccttcgccc aagcttaccc 551 cgtaagggtt tgctccttcg gctggcggcc ggctttgcgt tagcacctgt 601 atgcttgctt gctgtgtacg ctaccctgcc acgggaaaaa ctgtctgtat 651 ttaggctgag aactgaggcc cgcacacata tggaggatga gagggaagca 701 acggaatgtt tggtggtaga gccagctcga gagctcaagg gaaaggacgg 751 ggaggatctc ctcactggta gtagaatgac aaaggtaatt gcgtctacag 801 ggcgccctcg caggagacct tatgcagcga aagttgctca ggttgcaaga 851 gctaaggtgg gttaccttaa gaatagtcct gagaatagat taatctacca 901 gagagtcatc attgagatca tggacaagga ttgcgtcagg tatattgaca 951 gggatgtcat attgcctttg gctattggat gttgttttgt ctacccggac 1001 ggagtggaag agtcggcggc actctggggc tcgagcgagt ccctgggtgt 1051 gaaataggga ggcctagtgc gtctacctgg ggttgtgaca cagaccaatc 1101 gagatatccc atctggtgtg ttacttcccc aggaagtgct agaggttcgt 1151 acaggacctc ccaatgctaa ggaccgtaat atatttatgg ttgctggttg 1201 cccatcacag gcacggttct tagtgcataa tcattgcctg aaaaacctta 1251 agaggggtct tgtggaaaga gttttctgtg ttgagaaaaa cggaattctc 1301 actcgcactc cacaacctgc caaaggagcc tttagtcgtc tttccccgtt 1351 caggaaagcg gtttgtgaga aggtcggagt tgcccaccgt tttgggtatg 1401 atgggtttct atcatactac aacggtgcga agctgcgtac ttacacgcga 1451 gccgtggaga gtctgcatat ctcccccgtc tgtgagaggg atagtcattt 1501 gactaccttc gttaaggcgg agaagatatc gacgtctaag ggtgacccag 1551 cgcctagggt gatacagcct cgtaacccta ggtacaatgt ggaacttgga 1601 agatatctgc ggcatatgga gtccaaactg atgaaagctg tagatggcgt 1651 atttggtgaa acgacatgca ttaagggtta caccgctgat gaggtggggc 1701 agatctttag ggacaagtgg gacaaatttg atcgtccagt cgctattggt 1751 cttgatgcct cacggtttga tcaacactgt tcggttgaag cgttgcaatt 1801 tgagcatagc ttctacaggg ccatgtaccc tggcaacaag ctcttgagca 1851 agttgctcga atggcaactc cacaataaag ggaaaggata tgtgcctgat 1901 ggcactatta cctatcgtaa ggagggttgt cgtatgagtg gggatataaa 1951 cacatcactt ggtaattacc tgttaatgtg tgccatgatt tatggttata 2001 tgcgtcattt ggggatcaat gagtttagtc tggcgaactg tggggatgat 2051 tgtgttctca ttgtagaacg caagcatctt aaacggatac aaggcacact 2101 acccgagtat ttcctaaatc tgggttatac tatgaaggtg gaaccccctg 2151 tatttcaatt ggaggaggtt gaattctgcc aggcacaccc agtacagttt 2201 gaaggtggtt ggaagatggt tcggaatgtc cgtaccgcta tgagcaagga 2251 tgtacactgt gttaacaata ttaaagatct ggctacacgc aaggcgtgga 2301 gtaatgcaca acaccatggt ggcatagcac ttagtgctgg catacctgtg 2351 gttgagaagt tttactcccg gtttgctttg tatgagatgc caaagagaca 2401 ccaaagaatt gacacagtca caaacgtgca caagtggcgt ggatcgggtg 2451 gaaagtatag tgtgacccct gagtcaaggg caagcttttg gcaagccttt 2501 ggtctgacgg gggatgagca gcttgcttta gaggaccgtc tggatagatg 2551 ggagatggac ctatttggag aggagggtgt tgacgctcat gagcccagca 2601 tccttgactc cgccgtggcc tgaccaagtg aacacaagcg acatagcaat 2651 ggaaatcgtt aggagaaaca ataatagtgc aatcgcaatc aacaagaaac 2701 aactggccac tatggcggct actgccgccg ctggggctct gagcaattat 2751 gtgaagaaca atggagcaat ggtcgtacaa ggtgcggtga atatgggcaa 2801 gaaggcttat ggagcagtaa ggaatcgtaa gaataagggt aattcacagg 2851 caatggtgca cgtaggtggt atgggcgggg ctatgatggc ccctgtggca 2901 gtatcccggc aacttgtggg cagtaagcca aagttcgcag gtaggactgc 2951 tggatcagtc acagtcaccc accgtgagta cttaacccag gtgaacaact 3001 cctctgcttt tacaaccaat ggagggattg tcgggaattt gttacaactc 3051 aacccgctta atggcacact gttttcgtgg ttaccggcta tcgcgtcgaa 3101 cttcgatcag tacgtcttta acagcgttgt gttacattat gtccccctct 3151 gtggcacaaa tgaagtaggg cgtgttgcaa tgtactggga taaggactct 3201 gaggatcctg agcctgcgga tagagtggaa ttagctaatt tcggtatact 3251 taaagagacg gccccatggg ccgaagctat tttgagggtc ccaactgata 3301 agatgaaacg atactgcgat gacagtacag tggttgacag gaagcttatc 3351 gacctcggac agctcggaat atctacatat ggaggaaccg gaactaatcc 3401 tgtgggggat gtgtttgtgt cgtatagcgt tacgctttac ttcccacaac 3451 ccacgaatac cctactcagc acgcgacagc ttagccttac tggcgcccta 3501 gaagcatcta ctgggcctgg atatattaac gtaacacgta caccaacact 3551 cttgactata acattcaggt ctaccggaac tttcctgctt tcgggagttt 3601 tccgggacac tggtgttgct gttcttggtg tgacgggggg cataggaatt 3651 aatagtcaaa ccacacttga tgttgttggc gtagccacat catttcttgt 3701 gaactgtaca gtgtccacac tacccgctac actcacatat ggatctgctg 3751 ggataacatc tgtcactgcg aattgcacac gggccacaag ggccaacacc 3801 gtaacattgc tatagtcgcc tcggggcctc ttgaacagac cagttcatgg 3851 atactgaata cgaacaagtc aataaaccat ggagcgagct atacaaggaa 3901 gcgacgctag ggaacaagct tacagtgaac gttgggatgg aggatgtgga 3951 ggtaccatta ctcccttcaa acttcctgac gaaagtccga gtctcattga 4001 gtggaggcta cataacagtg aggagagtga ggataaagat aatccccttg 4051 gtttcaagga aagctggagt ttcgggaaag ttgtatttaa gagatatctc 4101 agatacgacg ggacggaagc ttcattgcac agagctcttg gatcttggga 4151 aagagatacg gttaacaatg cagcatctag atttctcggt ttcggccaga 4201 tcggatgtac ctattgtatt cggtttcgag gatcttgtct caccatttct 4251 ggagggtcgc gaactcttca gcgtctcatt gagatggcaa ttcggactaa 4301 gcgcacaatg ctacagctta ccccctgcga agtggaaggt aatgtatcaa 4351 gaggaagccc tgaaggcact gaagccttca aagaagaaag cgagtaagac 4401 agactcttca cgcttggagt gaagtttggt ggcaactata caccttagac 4451 tactggttac tactgtcagg ttggaaccca cattaattga gctaggtcgg 4501 gccccgtcgt aggattggtc acctacggaa tggggatatg gaaaggatct 4551 cgtaccctgt gagtcaaacg aaagttgtgc ttgggatatg gatctatgcc 4601 tagtaggtta tgtggtgtgt ctctgacttt aattggatgc cagttttcaa 4651 caggagtgga agtaactgaa caacactttg agcacggttg atctcaccct 4701 ccgggggggc tatagagatc gctggaaaca ctaccggaca accggaacat 4751 tgcagaaatg cagccc