Sequence of DPV Potato mop-top virus
Potato mop-top virus triple gene block protein 51K (tgbp1), triple gene block protein 13K (tgbp2), and triple gene block protein 21K (tgbp3) genes, complete cds.
ACC No: AY187010
Dated: 2004-12-20 | Length: 2852 | CRC: 1747994516
!!NA_SEQUENCE 1.0
ID AY187010 standard; genomic RNA; VRL; 2852 BP.
XX
AC AY187010;
XX
SV AY187010.1
XX
DT 06-FEB-2003 (Rel. 74, Created)
DT 20-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE Potato mop-top virus triple gene block protein 51K (tgbp1), triple gene
DE block protein 13K (tgbp2), and triple gene block protein 21K (tgbp3) genes,
DE complete cds.
XX
KW .
XX
OS Potato mop-top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
XX
RN [1]
RP 1-2852
RX PUBMED; 15284485.
RA Pecenkova T., Moravec T., Filigarova M., Rosecka P., Cerovska N.;
RT "Extended sequence analysis of three Danish potato mop-top virus (PMTV)
RT isolates";
RL Virus Genes 29(2):249-255(2004).
XX
RN [2]
RP 1-2852
RA Moravec T., Cerovska N., Pecenkova T., Nielsen S.L., Vlcek C.;
RT "The nucleotide sequence of potato mop-top isolate 54-15";
RL Unpublished.
XX
RN [3]
RP 1-2852
RA Moravec T., Cerovska N., Pecenkova T., Nielsen S.L., Vlcek C.;
RT ;
RL Submitted (27-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL Virology, Institute of Experimental Botany, Czech Academy of Sciences, Na
RL Karlovce 1a, Prague 16000, Czech Republic
XX
FH Key Location/Qualifiers
FH
FT source 1. .2852
FT /country="Denmark"
FT /db_xref="taxon:37128"
FT /mol_type="genomic RNA"
FT /organism="Potato mop-top virus"
FT /isolate="54-15"
FT gene 280. .1671
FT /gene="tgbp1"
FT CDS 280. .1671
FT /codon_start=1
FT /db_xref="GOA:Q80QA3"
FT /db_xref="UniProt/TrEMBL:Q80QA3"
FT /note="may be involved in cell to cell movement"
FT /gene="tgbp1"
FT /product="triple gene block protein 51K"
FT /protein_id="AAO32788.1"
FT /translation="MESGFNGSRPHRVKKDLPDRVNPVNTQGSSGTTGNAFRTNNNKKT
FT QNWKPRSGPGNRNEGDQTKNIKSDLQQPSEVYPEEQVRPESSTGESVKQQSEPHRVLED
FT KKQSGKTAGSSVRIPEEGGGGLGSANYLGKRQLDFVAKLCVESGFKSTGKPLKRYPAEF
FT FKSSGLLEKFDKYLSSRLDKGCNLSQRESEVVLKNLRSKRAEQSFLAGAVTGVPGSGKT
FT TLLRKVQCEGGFNSIVILGNPRSKTEFSNLPSCYTAKEILLLGIAIKCEVLLIDEYTLL
FT TSGEILLLQKITNSRIVILFGDRAQGSSNTLCSPEWLQVPVIFQSLTSRRFGKATANLC
FT RRQGFDFEGSEHEDKVVESPYEGSSPPTDINIVFSESTREDLLECGIESTLVSDVQGKE
FT YNTVTLFIPDEDREYLTNAHLRSVAFSRHKFVLEIRCNPELFMQLINGELASKQQPQTD
FT RYGPE"
FT gene 1658. .2017
FT /gene="tgbp2"
FT CDS 1658. .2017
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q80QA2"
FT /note="may be involved in cell to cell movement"
FT /gene="tgbp2"
FT /product="triple gene block protein 13K"
FT /protein_id="AAO32789.1"
FT /translation="MVRNNEIGARPNKYWPVVAAVVAICLFGFLTVTNQKHATQSGDNI
FT HKFANGGQYRDGSKSIKYNCNNPRAYNGSSSNNTFSQLFLPVLLIGAALYAYLWFTRPD
FT CSVTCRGDCCRSYGS"
FT gene 1872. .2444
FT /gene="tgbp3"
FT CDS 1872. .2444
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q80QA1"
FT /note="may be involved in cell to cell movement"
FT /gene="tgbp3"
FT /product="triple gene block protein 21K"
FT /protein_id="AAO32790.1"
FT /translation="MDPPVIIHSPNCSCQFCSSELPSTHTCGSQDRTVPSHVEATAAGH
FT MEAKNFSLQYVLLVAFVSVLLGFSFCVYLKSMSNDEASDMTYYYQDLNSVEIKLGKNPL
FT DPEVIKAIHSFQEFPYGNIPSIRREAEFDVQNDESSAVALSGSNNNRRQVVSTPCENNM
FT LLKLWKDDLSFTIIAVTVLVGAMLARY"
FT misc_feature 2372. .2578
FT /note="similar to cysteine-rich 8K protein; 8Kpg"
XX
SQ Sequence 2852 BP; 813 A; 518 C; 674 G; 847 T; 0 other;
AY187010 Length: 2852 January 4, 2005 08:57 Type: N Check: 2796 ..
1 ttgaatttcg aaaacacctc gatctgacga gtcgcgaaca cttgatcgac
51 tttagtcctc tctgttggtc attgaaaacc gtctagaatc acatttcgcc
101 cgtttgtacg atagaaattg attctcggaa gcttttcgat ctaacagatt
151 gtgagtattg ctggtctctg gtccttttcg ttgggaaaag ttgcaaattt
201 caatatcccg cccgctaagc gataggggtt tgtatttgtt tacttggttt
251 gaattcttag ttgtttcacg atttcttgta tggaaagcgg attcaacgga
301 agtagaccac acagagtgaa gaaggatttg cctgatagag tgaatccggt
351 taacactcag ggatcttctg gtacaactgg taacgcgttt agaacgaata
401 ataataagaa aacacaaaat tggaaaccta ggagcggtcc tggtaacagg
451 aacgagggcg accaaacaaa aaatatcaag tccgacttac aacaaccaag
501 cgaagtgtat cctgaagaac aggtgcgacc agaatcatca actggtgagt
551 ccgtaaagca acaatcagaa ccacaccgtg tgcttgaaga taaaaagcag
601 tcagggaaaa ccgcaggctc aagcgtgaga atacctgaag aaggtggtgg
651 tggtttaggg tcagcgaact acctcgggaa gagacagctc gactttgtcg
701 ctaaactttg tgttgaaagt ggattcaaat ctactggtaa gcccttgaaa
751 aggtatccgg cggagttttt caaaagttct ggtctgttag aaaaatttga
801 caagtactta agttcccgtt tggataaagg ttgcaacctt tcgcagaggg
851 agtctgaagt agttttaaag aatttgaggt cgaagagggc cgaacagtct
901 tttttggctg gtgccgtgac tggtgttcca ggtagcggaa aaactacttt
951 gctgaggaaa gtccagtgtg aaggaggttt taattccatt gtgattttgg
1001 gtaaccccag atcaaaaact gagttctcga atctgcctag ttgttataca
1051 gctaaggaga tattgttact cgggattgca attaagtgtg aggtgctttt
1101 aatagacgaa tatactctgt tgacgagtgg tgaaatatta ttactgcaga
1151 agatcactaa tagtcggata gttatactat tcggagatag agcccaaggc
1201 agtagtaata cattgtgcag cccggagtgg ttacaggtac ccgttatatt
1251 tcaatctctg acgagtagga gatttggtaa agctacagcg aatctgtgca
1301 gaaggcaagg ttttgacttt gaaggtagtg aacacgagga caaggttgta
1351 gagagtccct acgaagggag tagtccacct actgatatta acattgtgtt
1401 ctctgaaagc actcgtgaag atttacttga gtgcggtata gagtctacgc
1451 ttgttagtga cgtgcaagga aaagagtaca acactgtgac tttgtttata
1501 cctgacgagg accgagagta tctgaccaac gcccacctac gttccgtcgc
1551 tttttcccga cataagtttg tgcttgaaat ccgttgtaat ccagaactgt
1601 tcatgcagtt gattaacgga gaattggcat cgaaacagca accacaaaca
1651 gacaggtatg gtccggaata acgaaattgg agcgcgacca aataaatatt
1701 ggccggtagt tgcggcagta gttgcaattt gtcttttcgg ttttttaaca
1751 gttaccaatc aaaaacacgc tactcaatca ggtgataata tacataaatt
1801 tgctaacggt ggccagtaca gggacggttc taagagtatt aagtataatt
1851 gtaataatcc cagagcttat aatggatcct ccagtaataa tacattctcc
1901 caattgttct tgccagtttt gctcatcgga gctgccctct acgcatactt
1951 gtggttcaca agaccggact gttccgtcac atgtagaggc gactgctgca
2001 ggtcatatgg aagctaaaaa tttttctttg cagtatgttt tgttagtggc
2051 ttttgtcagt gttttattag gtttctcttt ttgtgtgtac ttaaagagta
2101 tgtctaatga tgaagcttct gatatgactt actattacca ggatttgaat
2151 tctgtcgaaa ttaaactggg aaagaatccg cttgatccag aagtcattaa
2201 ggctatacac agctttcagg aatttcctta tgggaatatt ccttcgataa
2251 gacgtgaggc tgaatttgat gttcaaaatg atgagtctag tgcggtggct
2301 ttgtccggtt ctaataataa tagaaggcaa gtagtaagta cgccctgtga
2351 aaataatatg ttacttaagt tgtggaaaga cgatttatcg tttactataa
2401 ttgcagtgac tgtgcttgtg ggtgctatgt tagctcgtta ttaacagtgt
2451 tcggtgcttg tgtgaatata tgtgtttgta ttgtattttt cattctcgtg
2501 tatttgtccg gttgttataa tatgagggtc ctaggtttta tacgggtatg
2551 catataccta tacaaattat gccgttgaca ctacgttaag tgttagtgct
2601 tacaggactt cggtccgtgg ttcacttaaa tcgaaccatt ggagtaatcc
2651 aacgttaata ctacgttaag tattggtgct tccagggcta aaccgtggtt
2701 caccttaatc gaaccagtct catttgagac aaaactgact tcctagctgt
2751 ttttgagata attccaaaaa actcattatc cggcttaggg aagagcggcc
2801 agttgctgct gcgatcaaga cacgatcgtt caaaagggtg caactacccc
2851 cc