Sequence of DPV Cryphonectria cubensis mitovirus 1b
Cryphonectria cubensis mitovirus 1b RNA-dependent RNA polymerase gene, complete cds.
ACC No: AY328477
Dated: 2004-07-02 | Length: 2601 | CRC: 1400750616
!!NA_SEQUENCE 1.0 ID AY328477 standard; genomic RNA; VRL; 2601 BP. XX AC AY328477; XX SV AY328477.1 XX DT 02-JUL-2004 (Rel. 80, Created) DT 02-JUL-2004 (Rel. 80, Last updated, Version 1) XX DE Cryphonectria cubensis mitovirus 1b RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Cryphonectria cubensis mitovirus 1b OC Viruses; ssRNA positive-strand viruses, no DNA stage; Narnaviridae; OC Mitovirus. XX RN [1] RP 1-2601 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT "Molecular characterization of mitoviruses co-infecting South African RT isolates of the Eucalyptus canker pathogen Cryphonectria cubensis"; RL Unpublished. XX RN [2] RP 1-2601 RA van Heerden S.W., Preisig O., Wingfield B.D., Wingfield M.J.; RT ; RL Submitted (24-JUN-2003) to the EMBL/GenBank/DDBJ databases. RL Department of Genetics, Forestry and Agricultural Biotechnology Institute, RL University of Pretoria, Pretoria, Gauteng 0001, Republic of South Africa XX FH Key Location/Qualifiers FH FT source 1. .2601 FT /db_xref="taxon:249053" FT /mol_type="genomic RNA" FT /organism="Cryphonectria cubensis mitovirus 1b" FT CDS 184. .2418 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q6EH20" FT /transl_table=4 FT /product="RNA-dependent RNA polymerase" FT /protein_id="AAR01971.1" FT /translation="MTKADHYSSASSDPPRWTDCCHNTRQHQPTFAIKWIITKTMKRNL FT NKLYIHLNLLRDIGAIKLSLVWFLHWSHLELGIASRLVSSAVARFQLLATTRGRNAAIS FT EFKASRLAFTRWLCGRPLSGKVGAPITKAGLPKVIPREARLLLLRERPLYLVKAVITVL FT SIGRYFKGGNPVKWENITKPSTPTLPKDGEILFGLEKLNIDVGQFEPTDWKFRWVVTAG FT PNGPSISSCLQDLPKFNGLFRSQVEVILPELLPIIDTLLTWEKSFKLSTLMGLAGFKDD FT SLRKIAIKDDREGKSRPFAIFDYWSQTVLSPLHDWAYATLRSIPQDCTFNQAEGLSKVT FT ARPSQKYFYSYDLEAATDRFPIQFQKKVLSLIFNTTYAQAWAEIMTQEPFRVKGLSDPL FT RWGAGQPLGAKSSWAIFTLCHHLVVHIAAVRTNSDPYYVILGDDIVLRGSRLATVYKRI FT MSELGVSISETKSHVSKDTFEFAKMWMHQGRNASGFPVVGLAETLRKPLEMAALFVFEL FT PAKGYPVTITPRTVSQYFLLVARYNTIPPRLAVWTADKVVWYYSFLSWLATRDDGWAKY FT IAQSASLLVSPNTAHDLLMKAVRDKWAKQLDKSLMDFQDFGFDMFDKVKTLPPFKPTWD FT PEAWPGRLSASGIEFNPAPRKVPIFAALQEEGEIKYSDYLQQKLEMTDDQLTFEEIESL FT KLPPRPQLKGFLPKRTREYVRTLNLISHGLNRDLRAQCIGTRPDVYNMKD" XX SQ Sequence 2601 BP; 701 A; 639 C; 614 G; 647 T; 0 other; AY328477 Length: 2601 October 20, 2004 11:42 Type: N Check: 2012 .. 1 cttttttttt ttttttttct ttcttctttt tttttttttt cttttttttc 51 cccccttgcc ccggtttccc ggggaaggca acggagaagg ggtgacagga 101 cccgaaaggc cccacttgtc aatcatccgt tccgtgtcca ctagctgctg 151 actgttactg actagccttg taacaacaaa gggataacca aagctgacca 201 ctactcaagt gcgagcagcg acccgccaag gtgaaccgat tgctgtcata 251 atactaggca gcaccagccc acgtttgcta taaaatgaat tataacaaaa 301 accatgaaaa gaaatctcaa taaactctat atacacctaa atctcttacg 351 agacatcggt gcaataaaat tgagtctagt gtgattcctt cactgatccc 401 accttgagct aggtatagcg tcacgtctcg tctcttccgc ggtagccaga 451 tttcaacttc tggccaccac gagagggcgg aacgccgcta tatccgagtt 501 taaggcgtcg cggctagcgt ttacacgatg actctgtggg cggccgctct 551 caggtaaagt tggtgccccg ataacaaaag ctgggcttcc taaggtaatc 601 cctagggagg ccagactttt gttgcttcgg gaacgccctc tttacttggt 651 aaaggccgtc ataacggtgc tatcgatcgg gcgttatttt aagggtggaa 701 accctgtaaa gtgggagaat attacgaagc cgtcaactcc taccctccca 751 aaagatggag aaatcctctt tgggttggag aagttgaaca ttgacgtcgg 801 gcagttcgag ccaacggatt ggaaattccg ttgagtcgtg acagccgggc 851 caaatgggcc aagtatatct tcctgcttac aggacctccc gaaatttaac 901 ggtctcttca ggtcccaggt agaagtcatt ctacctgagc tccttcccat 951 cattgatacc ctattgacct gggagaaaag ctttaagctg tcaaccctta 1001 tgggattggc aggctttaaa gacgattccc tccggaaaat agctatcaag 1051 gatgataggg agggtaagag tagacctttt gcgatattcg attactgatc 1101 ccagacagtt ttatcacctc tgcatgactg agcgtacgcg accctgaggt 1151 caattcctca ggattgcacg ttcaaccagg cagagggact gtcgaaggtc 1201 acagctcggc catcgcaaaa gtatttctat tcttacgacc ttgaagcggc 1251 aacagaccgt tttccgatac aatttcagaa aaaggttctg tccctgatct 1301 ttaacactac ttatgcccag gcgtgagctg agataatgac tcaagagcct 1351 tttagagtca agggattgtc cgacccctta agatgaggag ccgggcagcc 1401 tcttggagct aaaagttcct gagccatttt cacattatgc caccacctag 1451 tagttcatat agcagcggta cggactaact ccgaccccta ctacgtgata 1501 ctaggcgatg acatagtgct ccgtggctca cggctggcga cagtgtacaa 1551 acggataatg tccgaacttg gagtatccat atccgaaacg aaatcgcacg 1601 tgtcaaaaga cacgttcgaa ttcgctaaga tgtgaatgca ccaaggtagg 1651 aacgcgagtg ggttccctgt agtgggacta gctgagacac tcagaaagcc 1701 actagaaatg gcggctctct ttgtgtttga gctccctgct aaagggtatc 1751 cagtcactat tactccgcgc accgtgtcgc agtacttcct tctagtagca 1801 cgttataata ccattccacc tcgtctggcg gtatgaactg ccgacaaagt 1851 ggtatggtac tatagtttct tgtcatgact ggccacccgg gatgacggat 1901 gggcgaaata tatcgcccag tcggcctccc tattggtgag ccccaatacc 1951 gcccacgacc tccttatgaa ggccgtgaga gataaatggg ctaaacagct 2001 tgacaagtct ctaatggatt tccaggattt tggatttgat atgttcgaca 2051 aagtgaagac cttgccgcca ttcaagccta cctgggatcc agaagcgtga 2101 cctggtcggt tgtctgcgag tggaatcgaa ttcaatccag cccctaggaa 2151 ggtaccaata tttgctgctc tccaagaaga aggagagatc aagtattccg 2201 attatctcca acagaagttg gagatgaccg acgatcagct gacgttcgag 2251 gagatagaat ctttgaaact acctcctcgt ccgcaactga aagggttcct 2301 tccgaaaagg actagagagt atgttcgtac acttaaccta attagtcacg 2351 gcttaaaccg ggatctaagg gctcagtgca taggaaccag accagacgta 2401 tacaatatga aagactaaga ggttctccct cccaccttga gaaagtggtg 2451 aaagctctcc ttagccccta cacattgtgt acccccattc ccctttcggg 2501 gtaggcagaa gtcaactgct tgctccggca gggatgccgg atgggaagtc 2551 gacagcgctg gggcaaaaaa aaaaaaaaaa aaaagaaaaa aaaaagaaaa 2601 a