Sequence of DPV Potato mop-top virus
Potato mop-top virus isolate 54-19 triple gene block protein 51K gene, partial cds; and triple gene block protein 13K and triple gene block protein 21K genes, complete cds.
ACC No: AY353719
Dated: 2004-12-20 | Length: 2548 | CRC: -441084688
!!NA_SEQUENCE 1.0
ID AY353719 standard; genomic RNA; VRL; 2548 BP.
XX
AC AY353719;
XX
SV AY353719.2
XX
DT 28-AUG-2003 (Rel. 77, Created)
DT 20-DEC-2004 (Rel. 82, Last updated, Version 3)
XX
DE Potato mop-top virus isolate 54-19 triple gene block protein 51K gene,
DE partial cds; and triple gene block protein 13K and triple gene block
DE protein 21K genes, complete cds.
XX
KW .
XX
OS Potato mop-top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
XX
RN [1]
RP 1-2548
RX PUBMED; 15284485.
RA Pecenkova T., Moravec T., Filigarova M., Rosecka P., Cerovska N.;
RT "Extended sequence analysis of three Danish potato mop-top virus (PMTV)
RT isolates";
RL Virus Genes 29(2):249-255(2004).
XX
RN [2]
RP 1-2548
RA Cerovska N., Pecenkova T.;
RT "Potato mop-top virus isolate 54-19 RNA for 51K protein, 13K protein, and
RT 21K protein";
RL Unpublished.
XX
RN [3]
RP 1-2548
RA Cerovska N., Pecenkova T.;
RT ;
RL Submitted (29-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL Virology, Institute of Experimental Botany, Czech Academy of Sciences, Na
RL Karlovce 1a, Prague 16000, Czech Republic
XX
RN [4]
RC Sequence update by submitter
RP 1-2548
RA Cerovska N., Pecenkova T.;
RT ;
RL Submitted (01-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL Virology, Institute of Experimental Botany, Czech Academy of Sciences, Na
RL Karlovce 1a, Prague 16000, Czech Republic
XX
CC On Oct 1, 2003 this sequence version replaced gi:34014912.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2548
FT /country="Denmark"
FT /db_xref="taxon:37128"
FT /mol_type="genomic RNA"
FT /organism="Potato mop-top virus"
FT /isolate="54-19"
FT CDS <1. .1368
FT /codon_start=1
FT /db_xref="GOA:Q6V2D3"
FT /db_xref="UniProt/TrEMBL:Q6V2D3"
FT /product="triple gene block protein 51K"
FT /protein_id="AAQ56215.2"
FT /translation="RPHRVKKDLPDRVNPVNTQGSSGTTGNAFRTNNNKKTQNWKPRSG
FT PGNRNEGDQTKNIKSDLQQPSEVYPEEQVRPESSTGESVKQQSEPHRVLEDKKQSGKTA
FT GSSVRIPEEGGGGLGSANYLGKRQLDFVAKLCVESGFKSTGKPLKRYPAEFFKSSGLLE
FT KFDKYLSSRLDKGCNLSQRESEVVLKNLRSKRAEQSFLAGAVTGVPGSGKTTLLRKVQC
FT EGGFNSIVILGNPRSKTEFSNLPSCYTAKEILLLGIAIKCEVLLIDEYTLLTSGEILLL
FT QKITNSRIVILFGDRAQGSSNTLCSPEWLQVPVIFQSLTSRRFGKATANLCRRQGFDFE
FT GSEHEDKVVESPYEGSSPPTDINIVFSESTREDLLECGIESTLVSDVQGKEYNTVTLFI
FT PDEDREYLTNAHLRSVAFSRHKFVLEIRCNPELFMQLINGELASKQQPQTDRYGPE"
FT CDS 1355. .1714
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q6V2D2"
FT /product="triple gene block protein 13K"
FT /protein_id="AAQ56216.1"
FT /translation="MVRNNEIGARPNKYWPVVAAVVAICLFGFLTVTNQKHATQSGDNI
FT HKFANGGQYRDGSKSIKHNCNNPRAYNGSSSNNTFSQLFLPVLLIGAALYAYLWFTRPD
FT CSVTCRGDCCRSYGS"
FT CDS 1569. .2141
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q6V2D1"
FT /product="triple gene block protein 21K"
FT /protein_id="AAQ56217.1"
FT /translation="MDPPVIIHSPNCSCQFCSSGLPSTHTCGSQDRTVPSHVEATAAGH
FT MEAKNFSLQYVLLVAFVSVLLGFSFCVYLKSMSNDEASDMTYYYQDLNSVEIKLGKNPL
FT DPEVIKAIHSFQEFPYGNIPSIRREAEFDVQNDESSAVALSGSNNNRRQVVSTPCENNM
FT LLKLWKDDLSFTIIAVTVLVGAMLARY"
XX
SQ Sequence 2548 BP; 737 A; 462 C; 610 G; 739 T; 0 other;
AY353719 Length: 2548 January 4, 2005 08:57 Type: N Check: 8874 ..
1 agaccacaca gagtgaagaa ggatttgcct gatagagtga atccggttaa
51 cactcaggga tcttctggta caactggtaa cgcgtttaga acgaataata
101 ataagaaaac acaaaattgg aaacctagga gcggtcctgg taacaggaac
151 gagggcgacc aaacaaaaaa tatcaagtcc gacttacaac aaccaagcga
201 agtgtatcct gaagaacagg tgcgaccaga atcatcaact ggtgagtccg
251 taaagcaaca atcagaacca caccgtgtgc ttgaagataa aaagcagtca
301 gggaaaaccg caggctcaag cgtgagaata cctgaagaag gtggtggtgg
351 tttagggtca gcgaactacc tcgggaagag acagctcgac tttgtcgcta
401 aactttgtgt tgaaagtgga ttcaaatcta ctggtaagcc cttgaaaagg
451 tatccggcgg agtttttcaa aagttctggt ctgttagaaa aatttgacaa
501 gtacttaagt tcccgtttgg ataaaggttg caacctttcg cagagggagt
551 ctgaagtagt tttaaagaat ttgaggtcga agagggccga acagtctttt
601 ttggctggtg ccgtgactgg tgttccaggt agcggaaaaa ctactttgct
651 gaggaaagtc cagtgtgaag gaggttttaa ttccattgtg attttgggta
701 accccaggtc aaaaactgag ttctcgaatc tgcctagttg ttatacagct
751 aaggagatat tgttactcgg gattgcaatt aagtgtgagg tgcttttaat
801 agacgaatat actctgttga cgagtggtga aatattatta ctgcagaaga
851 tcactaatag tcggatagtt atactattcg gagatagagc ccaaggcagt
901 agtaatacat tgtgcagccc ggagtggtta caggtacccg ttatatttca
951 atctctgacg agtaggagat ttggtaaagc tacagcgaat ctgtgcagaa
1001 ggcaaggttt tgactttgaa ggtagtgaac acgaggacaa ggttgtagag
1051 agtccctacg aagggagtag tccacctact gatattaaca ttgtgttctc
1101 tgaaagcact cgtgaagatt tacttgagtg cggtatagag tctacgcttg
1151 ttagtgacgt gcaaggaaaa gagtacaaca ctgtgacttt gtttatacct
1201 gacgaggacc gagagtatct gaccaacgcc cacctacgtt ccgtcgcttt
1251 ttcccgacat aagtttgtgc ttgaaatccg ttgtaatcca gaactgttca
1301 tgcagttgat taacggagaa ttggcatcga aacagcaacc acaaacagac
1351 aggtatggtc cggaataacg aaattggagc gcgaccaaat aaatattggc
1401 cggtagttgc ggcagtagtt gcaatttgtc ttttcggttt tttaacagtt
1451 accaatcaaa aacacgctac tcaatcaggt gataatatac ataaatttgc
1501 taacggtggc cagtacaggg acggttctaa gagtattaag cataattgta
1551 ataatcccag agcttataat ggatcctcca gtaataatac attctcccaa
1601 ttgttcttgc cagttttgct catcggggct gccctctacg catacttgtg
1651 gttcacaaga ccggactgtt ccgtcacatg tagaggcgac tgctgcaggt
1701 catatggaag ctaaaaattt ttctttgcag tatgttttgt tagtggcttt
1751 tgtcagtgtt ttattaggtt tctctttttg tgtgtactta aagagtatgt
1801 ctaatgatga agcttctgat atgacttact attaccagga tttgaattct
1851 gtcgaaatta aactgggaaa gaatccgctt gatccagaag tcattaaggc
1901 tatacacagc tttcaggaat ttccttatgg gaatattcct tcgataagac
1951 gtgaggccga atttgatgtt caaaatgatg agtctagtgc ggtggctttg
2001 tccggttcta ataataatag aaggcaagta gtaagtacgc cctgtgaaaa
2051 taatatgtta cttaagttgt ggaaagacga tttatcgttt actataattg
2101 cagtgactgt gcttgtgggt gctatgttag ctcgttatta acagtgttcg
2151 gtgcttgtgt gaatgtatgt gtttgtattg tatttttcat tctcgtgtat
2201 ttgtccggtt gttataatat gagggtccta ggttttatac gggtatgcat
2251 atacctatac aaattatgcc gttgacacta cgttaagtgt tagtgcttac
2301 aggacttcgg tccgtggttc acttaaatcg aaccattgga gtaatccaac
2351 gttaatacta cgttaagtat tggtgcttcc agggctaaac cgtggttcac
2401 cttaatcgaa ccagtctcat ttgagacaaa actgacttcc tagctgtttt
2451 tgagataatt ccaaaaaact cattatccgg cttagggaag agcggccagt
2501 tgctgctgcg atcaagacac gatcgttcaa aagggtgcaa ctcccccc