Sequence of DPV Havel River virus
Havel river tombusvirus strain S coat protein and movement protein genes, complete cds; and unknown gene.
ACC No: AY370535
Dated: 2005-04-16 | Length: 2088 | CRC: -1448649477
!!NA_SEQUENCE 1.0 ID AY370535 standard; genomic RNA; VRL; 2088 BP. XX AC AY370535; XX SV AY370535.1 XX DT 01-SEP-2004 (Rel. 81, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Havel river tombusvirus strain S coat protein and movement protein genes, DE complete cds; and unknown gene. XX KW . XX OS Havel river tombusvirus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Tombusvirus. XX RN [1] RP 1-2088 RA Koenig R.; RT "Isolation of two strains of a new tombusvirus (Havel river virus, HaRV) RT from surface waters in Germany"; RL Eur. J. Plant Pathol. 0:0-0(2004). XX RN [2] RP 1-2088 RA Koenig R.; RT ; RL Submitted (18-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL Institut fuer Pflanzenvirologie, Mikrobiologie und biologische Sicherheit, RL Biologische Bundesanstalt fur Land- und Forstwirtschaft, Messeweg 11, RL Braunschweig D38104, Germany XX FH Key Location/Qualifiers FH FT source 1. .2088 FT /db_xref="taxon:254711" FT /mol_type="genomic RNA" FT /organism="Havel river tombusvirus" FT /strain="S" FT CDS 19. .1161 FT /codon_start=1 FT /db_xref="GOA:Q67BT1" FT /db_xref="InterPro:IPR000937" FT /db_xref="UniProt/TrEMBL:Q67BT1" FT /product="coat protein" FT /protein_id="AAR26609.1" FT /translation="MSIVTRNSDRALARLAAPAAMAGARMIVENKEVLWNGAKWIWANL FT PKRKKGNKSNGGLISHPQTLPGAIAAPISYAYPVRGRKPKFQASKGSVRITHREYISVI FT EGNTDGNFVVNNGSGASNDFSINPLNPFVFPWLVSIASNFDQYTFRSLKFEYIPLANTG FT ASGRVALFFDKDSTDPGPDDRSALANYRHLSEISPWAIARLTAPTDNVKRFMADNTTAD FT PKLINLGKVGWVTYASQFANLGDLFVEYTVDLYEAQPTAATLESLFRESTNGALTRVGL FT PYFTLEVADGTSLVYQARVPGTYLVTVIFNNTTAGFAISISGGGIINSSFGVSSAGRTS FT VTANVTITRNANLSITSLIGATNAQIFVAKANKDNAVAVV" FT CDS 1192. .1761 FT /codon_start=1 FT /db_xref="GOA:Q67BT0" FT /db_xref="InterPro:IPR005332" FT /db_xref="UniProt/TrEMBL:Q67BT0" FT /product="movement protein" FT /protein_id="AAR26610.1" FT /translation="MDTEYGQVNKPWKELYKEATLGNKLTVNVGMEDVEVPLLPSNFLT FT KVRVSMSGGYITVRRVRIKIIPLVSRKAGVSGKLYLRDISDTTGRKLHCTELLDLGKEV FT RLTMQHLDFSVLARSDVPIVFGFEDLVSPYLEGRELYSVSLRWQFGLSAQCYSLPPAKW FT KVMYQEDALKALKPSKRKASKTDSSV" FT CDS 1224. .1742 FT /codon_start=1 FT /db_xref="GOA:Q67BS9" FT /db_xref="InterPro:IPR004905" FT /db_xref="UniProt/Swiss-Prot:Q67BS9" FT /product="unknown" FT /protein_id="AAR28057.1" FT /translation="MEGAIQGSDAREQANSERWDGGCGGTITPFKLPDESPGLHEWRLH FT NSEESEDKDHPLGFKESWGFGKVVFKRYLRYDGTEASLHRALGSWERGSVNDAASRFLG FT LGQVGCTYSIRFRGSCLTLSGGSRTLQRLIEMAIRTKRTMLQLTPSEVEGNVSRGRPEG FT AKAFEKESE" XX SQ Sequence 2088 BP; 571 A; 444 C; 558 G; 515 T; 0 other; AY370535 Length: 2088 April 19, 2005 08:49 Type: N Check: 7428 .. 1 aagtatacac aagcacacat gtctatcgta acaagaaata gcgatagagc 51 tctggcgaga ctggccgcgc ctgccgctat ggcaggtgcg cgcatgattg 101 ttgagaataa agaggtgtta tggaatggag ccaaatggat ttgggcaaat 151 ttgcccaagc ggaagaaagg taataagagt aatggtggat tgatatcaca 201 cccgcagacg ctccctggag ctatagctgc accaatctct tatgcctacc 251 cagtcagggg acgcaagcct aaatttcaag cgtctaaggg gtcggtaagg 301 atcacccatc gtgagtacat tagtgtgatc gagggtaata ccgatggtaa 351 tttcgtcgtt aacaatgggt caggggcaag taatgatttt agcatcaacc 401 cgctcaaccc ctttgttttc ccgtggttag ttagcattgc atccaacttt 451 gatcagtaca catttcgcag tttaaaattc gagtatattc ctctagcgaa 501 cacaggagcg tctggtagag tggcattatt ctttgataaa gatagcacag 551 accctgggcc cgatgatcgg tcggccctgg cgaactatcg gcatcttagt 601 gaaatctccc cttgggcgat tgccaggctc acagcaccaa ccgataatgt 651 taagaggttt atggccgata atacaactgc tgatccgaaa ttgataaatc 701 tcggaaaagt tggatgggtg acgtatgcgt cccaattcgc taacctgggt 751 gacttattcg tcgagtacac cgtagacctt tatgaagcgc agcctacagc 801 agctacactg gagtctctct ttagggagag tacaaatggg gcgctgacgc 851 gtgttgggtt accctacttc actcttgagg tagcggatgg cacatcacta 901 gtttaccagg cacgtgtccc tgggacttac ctcgttactg tgatcttcaa 951 taataccact gctgggtttg cgattagcat ctctggcgga ggaattataa 1001 atagctcatt tggggttagt tccgcgggta gaacgtccgt tacagcaaac 1051 gtaaccataa caagaaatgc taatctcagc ataaccagtc tgattggagc 1101 aactaatgcc caaatattcg tcgccaaggc gaacaaggat aatgcggtgg 1151 cagttgtgtg attgaagggg cttcttgaat acgaccaatt catggatact 1201 gaatacggac aagtcaataa accatggaag gagctataca aggaagcgac 1251 gctagggaac aagctaacag tgaacgttgg gatggaggat gtggaggtac 1301 cattactccc ttcaaacttc ctgacgaaag tccgggtctc catgagtgga 1351 ggctacataa cagtgaggag agtgaggata aagatcatcc ccttggtttc 1401 aaggaaagct ggggtttcgg gaaagttgta tttaagagat atctcagata 1451 cgacgggacg gaagcttcat tgcacagagc tcttggatct tgggaaagag 1501 gttcggttaa cgatgcagca tctagatttc tcggtcttgg ccaggtcgga 1551 tgtacctata gtattcggtt tcgaggatct tgtctcacct tatctggagg 1601 gtcgcgaact ctacagcgtc tcattgagat ggcaattcgg actaagcgca 1651 caatgttaca gcttaccccc agcgaagtgg aaggtaatgt atcaagagga 1701 cgccctgaag gcgctaaagc cttcgaaaag gaaagcgagt aagacagact 1751 cttcagtctg atactgccga agcgagtgaa tactgtttga gcatgcaggt 1801 tactcttcgt attgttcggt ctacataatg acgagtcagg tcaggctccg 1851 cactaggttc ggtcacctag gggatggaga catggaaggg atctcgtgcg 1901 ctataagtct aacgaaagtt gagcttgcga catgggtcta tgcctggata 1951 agttgtgtag gttgccgcat acgatgaatt ggatgcctgt ttacgactaa 2001 tagggaacac tagtggaaac agtaaaggac acggttcatc tcacccttcg 2051 ggggggctat agagatcgct ggaagcacta ccggacaa