Sequence of DPV Cymbidium ringspot virus
Cymbidium ringspot virus isolate Lim 5 coat protein gene, complete cds.
ACC No: AY500885
Dated: 2005-02-14 | Length: 1194 | CRC: -1951634213
!!NA_SEQUENCE 1.0 ID AY500885 standard; genomic RNA; VRL; 1194 BP. XX AC AY500885; XX SV AY500885.1 XX DT 23-SEP-2004 (Rel. 81, Created) DT 14-FEB-2005 (Rel. 82, Last updated, Version 3) XX DE Cymbidium ringspot virus isolate Lim 5 coat protein gene, complete cds. XX KW . XX OS Cymbidium ringspot virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Tombusvirus. XX RN [1] RP 1-1194 RX DOI; 10.1007/s00705-004-0331-x. RX PUBMED; 15593416. RA Koenig R., Verhoeven J.T., Fribourg C.E., Pfeilstetter E., Lesemann D.E.; RT "Evaluation of various species demarcation criteria in attempts to classify RT ten new tombusvirus isolates"; RL Arch. Virol. 149(9):1733-1744(2004). XX RN [2] RP 1-1194 RA Koenig R.; RT ; RL Submitted (12-DEC-2003) to the EMBL/GenBank/DDBJ databases. RL Institut fuer Pflanzenvirologie, Mikrobiologie und Biologische Sicherheit, RL Biologische Bundesanstalt fuer Land- und Forstwirtschaft, Messeweg 11, RL Braunschweig D38104, Germany XX FH Key Location/Qualifiers FH FT source 1. .1194 FT /db_xref="taxon:12144" FT /mol_type="genomic RNA" FT /organism="Cymbidium ringspot virus" FT /isolate="Lim 5" FT CDS 12. .1148 FT /codon_start=1 FT /db_xref="GOA:Q64IS3" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR008975" FT /db_xref="UniProt/TrEMBL:Q64IS3" FT /product="coat protein" FT /protein_id="AAT00607.2" FT /translation="MALTTTNNNRAMARAAKQALPALGALATSGVGQQMFMSGVNYAIE FT KGKQFVNNRRKGRKQSDMVLHPGAFPGSVAAPVAISRIVRGSRPKFIRSKGAVTISHRE FT LVGQFNSSSGLVVNGGITGNLYRINPANAVLFPWLQTLASNFDQYVFNNLRLQYVPMCA FT TTETGRVAIYFDKDSQDLEPVDRVELANMRHLTETAPWCEASLQVPVDRVKRFMNDNST FT VDPKLIDLGQVGLATYGGPGTGVVGDLFIHYTVTFYEPQPSSGLIETDQSGTGSADAGP FT VLVSVVGTATTTTLTFRSPGTYLVMMVQRALTFTGVTPIALTFNSNTNTTAAGTNYAAL FT YNVTVPVPGAQMQFVGTGFGNYTLQVARAKITNVATLI" XX SQ Sequence 1194 BP; 308 A; 284 C; 308 G; 294 T; 0 other; AY500885 Length: 1194 February 22, 2005 08:35 Type: N Check: 8125 .. 1 aagattacac aatggcactt acgactacaa ataataatag agcaatggct 51 cgagcagcga aacaagcatt acccgcgctg ggtgctttgg cgacatcagg 101 agttggacag cagatgttca tgagcggtgt gaattatgca attgagaaag 151 gcaagcaatt cgttaacaat cgcaggaaag ggaggaaaca atctgacatg 201 gtgttgcacc ctggggcttt tccggggtct gttgcagcac cggtggcgat 251 atctagaatc gtcaggggat cacgaccgaa atttataagg agcaaagggg 301 ctgtcaccat ctcgcaccgt gagttggttg gccagttcaa tagctcctct 351 gggttagtgg ttaacggggg aatcacaggg aatctctaca ggataaatcc 401 ggctaatgcc gtactgttcc cttggttaca aacattagcg tcaaactttg 451 accagtacgt gttcaacaat ctgaggctcc agtatgtacc tatgtgtgcc 501 actactgaga ccggacgagt tgctatctac tttgacaagg actctcaaga 551 ccttgaacct gtggatcgcg ttgaactagc taacatgcgg cacctcacag 601 agacggcacc atggtgcgag gcctctctac aagtgcccgt ggacagggtg 651 aaaaggttta tgaacgataa ttccaccgtt gaccctaagc ttatagattt 701 aggtcaggtt gggctggcaa cttatggagg accgggaact ggtgtggtgg 751 gagatctgtt catccactac acagttacct tctatgagcc acaaccatcc 801 tcaggtctga tagaaactga tcaatctggt acaggctctg ctgacgcagg 851 accagtactg gtgtctgtgg tgggcactgc aactaccacc acgttgactt 901 tcagatctcc gggaacttac cttgtcatga tggtgcagcg ggcactcacc 951 tttacaggtg ttacgcctat tgcgctcacg tttaattcca acaccaacac 1001 taccgccgct ggaacgaact acgccgccct gtacaatgta actgtccccg 1051 ttcctggggc acagatgcag tttgtcggca ctgggtttgg caattatact 1101 ctacaagttg cacgagctaa gattaccaat gttgctacac ttatttagtc 1151 ggtgagtgtc taggggcctc ttgaacaaga ccagttcatg gata