Sequence of DPV Mungbean yellow mosaic India virus
Mungbean yellow mosaic India virus - [India:Varanasi:Dolichos:2005] segment DNA-A, complete sequence.
ACC No: AY547317
Dated: 2006-10-20 | Length: 2736 | CRC: 1804092616
ID AY547317; SV 1; circular; genomic DNA; STD; VRL; 2736 BP.
XX
AC AY547317;
XX
DT 11-MAR-2004 (Rel. 79, Created)
DT 20-OCT-2006 (Rel. 89, Last updated, Version 4)
XX
DE Mungbean yellow mosaic India virus - [India:Varanasi:Dolichos:2005] segment
DE DNA-A, complete sequence.
XX
KW .
XX
OS Mungbean yellow mosaic India virus - [India:Varanasi:Dolichos:2005]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2736
RX DOI; 10.1016/j.biortech.2005.09.004.
RX PUBMED; 16242317.
RA Singh S.K., Chakraborty S., Singh A.K., Pandey P.K.;
RT "Cloning, restriction mapping and phylogenetic relationship of genomic
RT components of MYMIV from Lablab purpureus";
RL Bioresour. Technol 97(15):1807-1814(2006).
XX
RN [2]
RP 1-2736
RA Singh S.K., Chakraborty S., Singh A.K., Pandey P.K.;
RT "Molecular characterization of begomoviruses causing yellow mosaic disease
RT on cowpea (Vigna unguiculata) and hyacinth bean (Lablab purpureus)";
RL Unpublished.
XX
RN [3]
RP 1-2736
RA Chakraborty S., Singh S.K., Singh A.K., Pandey P.K.;
RT ;
RL Submitted (12-FEB-2004) to the EMBL/GenBank/DDBJ databases.
RL Plant Virology Laboratory, Indian Institute of Vegetable Research, PB. No.
RL 5002, Varanasi, Uttar Pradesh 221 005, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2736
FT /organism="Mungbean yellow mosaic India virus -
FT [India:Varanasi:Dolichos:2005]"
FT /segment="DNA-A"
FT /specific_host="Dolichos"
FT /strain="Varanasi"
FT /mol_type="genomic DNA"
FT /country="India"
FT /virion
FT /db_xref="taxon:407833"
FT gene 146. .487
FT /gene="AV2"
FT CDS 146. .487
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /db_xref="GOA:Q6QDB0"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="UniProtKB/TrEMBL:Q6QDB0"
FT /protein_id="AAS55087.1"
FT /translation="MWDPLLNDFSESLHGFRCMLAIKYLQQVQENYPSNSLGFLYLTGL
FT IQVLRIRNHAQADLRYGLLYPDIECTEKIKLRYPARAACVCGRCPYQHEEKTLDQPPHV
FT EETSVLPTV"
FT gene 306. .1079
FT /gene="AV1"
FT CDS 306. .1079
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /note="responsible for encapsidation of viral DNA and
FT insect transmission"
FT /db_xref="GOA:Q6QDA9"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:Q6QDA9"
FT /protein_id="AAS55086.1"
FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLVLPASVGGVPTNMKRRRW
FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITH
FT RIGKRFCIKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE
FT PSTATVKNDLRDRYQVLRKFSATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN"
FT gene complement(1076. .1480)
FT /gene="AC3"
FT CDS complement(1076. .1480)
FT /codon_start=1
FT /gene="AC3"
FT /product="replicational enhancer protein"
FT /note="enhances replication of geminiviruses"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:Q6QDA8"
FT /protein_id="AAS55090.1"
FT /translation="MDFRTGEYITAAQLKSGVYIWEVQNPLSFKIMHHSPILAGSRMMV
FT TKLRIMFNHGLKKALRMHKCFLDLKLYHYLTATSGMILSIFRRPIFKFLNNLGVISLAN
FT ILYFASDFLYVKLHLVEDVSFTHNVQYKLY"
FT gene complement(1218. .1670)
FT /gene="AC2"
FT CDS complement(1218. .1670)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcriptional activator protein"
FT /note="aids in transcription of viral sense ORFs"
FT /db_xref="GOA:Q6QDA7"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="InterPro:IPR009072"
FT /db_xref="UniProtKB/TrEMBL:Q6QDA7"
FT /protein_id="AAS55089.1"
FT /translation="MKRTMLRLNSGLQRMRNSTPSKNHCSPPSIKVQHRVAKKRAIRRS
FT RIDLTCGCSYYIHINCRNYGFSHRGVHHCSSTQEWRLYLGGAKSPLFQDHAPQSNSSRV
FT QNDGDQAAHNVQPRVEESTKDAQVLPGLEALPLFDGDFWDDLIDLP"
FT gene complement(1528. .2616)
FT /gene="AC1"
FT CDS complement(1528. .2616)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /note="DNA polymerase; responsible for viral replication"
FT /db_xref="GOA:Q6QDA6"
FT /db_xref="HSSP:P27260"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:Q6QDA6"
FT /protein_id="AAS55088.1"
FT /translation="MPREGRFAINARNYFLTYPRCPLTKEDALEQLLALSTPVNKKFIR
FT ICRELHEDGQPHLHVLLQFEGKQQTRNQRFFDLYSRCRSTHYHPNIQAAKSCSDVKTYM
FT EKDGDILDHGTFQIDGRSARGGKQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH
FT NLNCNLSRIFTEPIQAYKSPFTLESFNKVPSYISSWAERNVRDPAARPDRPISIVIEGD
FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL
FT FSTVNQGSTQGRQEESNSTISN"
FT gene complement(2166. .2465)
FT /gene="AC4"
FT CDS complement(2166. .2465)
FT /codon_start=1
FT /gene="AC4"
FT /product="transcriptional regulator protein"
FT /note="may be involved in symptom expression"
FT /db_xref="UniProtKB/TrEMBL:Q6QDA5"
FT /protein_id="AAS55091.1"
FT /translation="MKMDSLISMFCFSSKGSNKRGTKGSSTSIPDAGQHITIRTFRQLR
FT AAQMLKHTWRKTETFLIMEPSKSMADQLEEVNNLPTTHTPRHSTLDQSWRPSLY"
XX
SQ Sequence 2736 BP; 730 A; 574 C; 612 G; 820 T; 0 other;
ay547317 Length: 2736 20-OCT-2006 Type: N Check: 291 ..
1 accgcgaccg gtgtattggg gtaactctaa cttttctgct tttgtggtac
51 ccttatcttt agtcgttcat tcagaagcgc tcctcagcgc tatgttaatt
101 caaatttgaa ttataaagca agtggacact ttgaacccac taacaatgtg
151 ggatccattg ttgaacgact tttccgaatc actgcatgga ttccggtgca
201 tgttggcaat aaagtatttg cagcaagttc aagagaatta tccatctaat
251 tctcttggtt ttttgtacct tacagggtta attcaggtat tgcgcatccg
301 gaatcatgcc caagcggacc tacgatacgg ccttctctac cccgatatcg
351 aatgcacgga gaagattaaa cttcgatacc ccgctcgtgc tgcctgcgtc
401 tgtgggaggt gtccctacca acatgaagag aagacgttgg accaaccgcc
451 ccatgtggag gaaacctcgg ttttaccgac tgtataggtc ccctgatgtc
501 cctcgtggtt gtgagggacc atgtaaagtt caatcatttg agcaaaggca
551 tgatattgcc cacacaggca aagtgatttg catatctgac gtgactagag
601 gtaatggaat tacacatcgt attggcaaac gattttgcat caagtccgtg
651 tacattactg gtaaggtttg gatggacgaa aatattaagt ccaaaaatca
701 cacgaacact gtgatgttca agttatgtcg tgacagacga ccttttggta
751 cacccatgga ttttggtcaa gtgttcaaca tgtatgacaa tgagcccagt
801 acagctactg tgaagaacga tctgcgtgat cgttatcaag tcctgcgaaa
851 gtttagtgcc actgttactg gtggccaata tgcttgtaag gaacaagcca
901 tggtgaatcg tttcttcaaa gttaataatt atgttgttta caaccaccag
951 gaggcagcga agtatgagaa ccatactgag aacgcattat tattgtatat
1001 ggcatgtact catgcctcaa atcctgtgta tgcaacactt aaaattcgga
1051 tctattttta tgattcgata ttgaattaat aaagtttgta ttgaacatta
1101 tgcgtaaagc ttacatcctc caccaagtgg agttttacat acaggaaatc
1151 cgacgcgaaa tataaaatat ttgctaagct aatgactcct aaattattta
1201 gaaacttaaa tattggtcta cggaagatcg ataagatcat cccagaagtc
1251 gccgtcaaat aatggtagag cttcaagtcc aggaagcact tgtgcatcct
1301 tagtgctttc ttcaacccgt ggttgaacat tatgcgcagc ttggtcacca
1351 tcattctgga ccctgctaga attggactgt ggtgcatgat cttgaaagag
1401 aggggatttt gcacctccca gatatagacg ccactcttga gttgagctgc
1451 agtgatgtac tcccctgtgc gaaaatccat agttgcggca gttgatatgg
1501 atgtaatagc tacacccaca ggttagatca attcgagatc gtcgaattgc
1551 tctcttcttg gcgaccctgt gttgaacctt gattgacggt ggagaacagt
1601 ggttctttga gggtgtagaa ttccgcattc tttgaagccc actgtttaag
1651 cgcagcattg ttctcttcat ccaagtactc tttataggag gacttgggac
1701 cagggttaca cagaaagatg gtggggatac cacctttaat tttagtgggc
1751 ttcccgtact tgacgttaga ctgccagtct ctttgcgcgc ccatgaattc
1801 tttgaaatgt ttcaaataat gtggatcaac gtcatcgatg acgttgtacc
1851 atgcctcgtt agagtatgtt ttgtcgttta gatccaaatg gccgcaaaga
1901 taattatgag gacctatggc acgtgcccac atggttttac ccgtgcgact
1951 atctccttca ataacaatac taataggtct atctggccgc gcagcgggat
2001 ctctcacatt tctttcagcc catgaagaaa tgtagctggg aaccttgttg
2051 aatgactcta atgtaaaagg cgacttatat gcctgaatag gctctgtgaa
2101 tatccgagac aaattacaat ttaagttatg aaattgtaaa ataaaatcct
2151 tgggagcctt ttcttttaat ataaggaggg cctccaactt tgatccagag
2201 ttgagtgcct cggcgtatgc gtcgttggca gattgtttac ctcctcgagc
2251 tgatctgcca tcgatttgga aggttccatg atcaagaatg tctccgtctt
2301 tctccatgta tgttttaaca tctgagcagc tcttagctgc ctgaatgttc
2351 ggatggtaat gtgttgaccg gcatctggaa tagaggtcga agaacctttg
2401 gttcctcgtt tgttgcttcc cttcgaactg aagcagaaca tggagatgag
2451 gctgtccatc ttcatggagt tcacgacaga tgcggatgaa cttcttgtta
2501 accggtgttg acaacgcgag aagttgttca agagcgtcct cctttgtaag
2551 aggacatctg ggatatgtca agaaatagtt tcttgcgttt atagcaaaac
2601 gaccttccct tggcatattt gaagtcgttt ttgtatcggt gtacaccgat
2651 tacttctcta tccccctatc ggtgtatcgg tgtactatat atactagagc
2701 tactaaaagc ccataggggc actcagctat aatatt