Sequence of DPV Citrus tristeza virus

Citrus tristeza virus coat protein gene, complete cds.

ACC No: AY550252

Dated: 2004-03-16 | Length: 687 | CRC: 37507613

                !!NA_SEQUENCE 1.0
ID   AY550252   standard; genomic RNA; VRL; 687 BP.
XX
AC   AY550252;
XX
SV   AY550252.1
XX
DT   16-MAR-2004 (Rel. 79, Created)
DT   16-MAR-2004 (Rel. 79, Last updated, Version 1)
XX
DE   Citrus tristeza virus coat protein gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-687
RA   Anfoka G.H., Abhary M.K., Nakhla M.K., Maxwell D.P.;
RT   "Detection and characterization of Citrus tristeza virus (CTV) in Jordan";
RL   Unpublished.
XX
RN   [2]
RP   1-687
RA   Anfoka G.H., Abhary M.K., Nakhla M.K., Maxwell D.P.;
RT   ;
RL   Submitted (17-FEB-2004) to the EMBL/GenBank/DDBJ databases.
RL   Biotechnology, Al-Balqa' Applied University, Al-Salt, Al-Balqa 19117,
RL   Jordan
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .687
FT                   /country="Jordan:Jordan Valley"
FT                   /db_xref="taxon:12162"
FT                   /mol_type="genomic RNA"
FT                   /note="collected February 10"
FT                   /virion
FT                   /organism="Citrus tristeza virus"
FT   CDS             5. .676
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AAS57918.1"
FT                   /translation="MDDETKKLKNKNKETKEDDNVVAAESSFGSVNLHIDPTLIAMNDV
FT                   RRLGTQQNAALNRDLFLTLKEKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVITNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 687 BP; 197 A; 125 C; 176 G; 189 T; 0 other;

 AY550252  Length: 687  March 24, 2004 12:44  Type: N  Check: 9892  ..

       1  gattatggac gacgaaacaa agaaattgaa gaacaaaaac aaggaaacga
      51  aagaagacga caatgttgtt gcagcggagt cttctttcgg ttctgtaaac
     101  ttacacatcg atccgactct gatagcgatg aacgatgtgc gtcggttggg
     151  tacccaacag aatgccgctt tgaacagaga tttgtttctt actttgaaag
     201  agaagtatcc taatttgtct gataaagata aggactttca cttagctatg
     251  atgttgtatc gtttagcggt taagagttca tcattgcaaa gcgatgacga
     301  cactacgggt ataacgtaca ctcgggaggg cgtcgaagtg gatttgtctg
     351  acaaactttg gactgacgtc gtgtttaatt ctaagggtat cggtaaccgt
     401  actaacgccc ttcgagtctg gggtaggact aacgatgccc tttatttagc
     451  cttttgtaga cagaatcgca atttgagtta tggcggacgt ccgctagatg
     501  cagggattcc ggccgggtat cattacctgt gtgcagattt cttgaccgga
     551  gctggcttga ctgatttaga gtgtgctgtg tacatacaag ctaaagaaca
     601  attgttgaag aagcgagggg ctgatgaagt cgtaattacc aatgtcaggc
     651  agcttgggaa attcaacaca cgttgataat cactagt