Sequence of DPV African cassava mosaic virus
African cassava mosaic virus-Uganda Mild isolate aug124 AV2 and AV1 genes, complete cds.
ACC No: AY562429
Dated: 2004-09-24 | Length: 1300 | CRC: -188606442
!!NA_SEQUENCE 1.0
ID AY562429 standard; genomic DNA; VRL; 1300 BP.
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AC AY562429;
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SV AY562429.1
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DT 24-SEP-2004 (Rel. 81, Created)
DT 24-SEP-2004 (Rel. 81, Last updated, Version 1)
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DE African cassava mosaic virus-Uganda Mild isolate aug124 AV2 and AV1 genes,
DE complete cds.
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KW .
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OS African cassava mosaic virus-Uganda Mild
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC African cassava mosaic virus.
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RN [1]
RP 1-1300
RA Sseruwagi P., Rey C.M.E., Brown J.K., Legg J.P.;
RT "The cassava mosaic geminiviruses occurring in Uganda following the 1990s
RT epidemic of severe cassava mosaic disease";
RL Ann. Appl. Biol. 145(1):113-121(2004).
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RN [2]
RP 1-1300
RA Sseruwagi P., Rey C.M.E., Brown J.K., Legg J.P.;
RT ;
RL Submitted (01-MAR-2004) to the EMBL/GenBank/DDBJ databases.
RL Cassava Virology, International Institute of Tropical Agriculture, Eastern
RL and Southern Africa Regional Center, P. O. Box 7878, Kampala, Uganda
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FH Key Location/Qualifiers
FH
FT source 1. .1300
FT /country="Uganda"
FT /db_xref="taxon:222076"
FT /mol_type="genomic DNA"
FT /organism="African cassava mosaic virus-Uganda Mild"
FT /strain="ACMV-UGMld"
FT /isolate="aug124"
FT /segment="DNA-A"
FT CDS 135. .476
FT /codon_start=1
FT /product="AV2"
FT /protein_id="AAU43918.1"
FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL
FT VSVIRARNYVEATRRYHHFHSRLQSSSKTELRQPIQEPCYCPHCPRHKSKTGLDEQAHV
FT QKAHDVQDV"
FT CDS 295. .1071
FT /codon_start=1
FT /note="coat protein"
FT /product="AV1"
FT /protein_id="AAU43919.1"
FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRAIAPTVHVTNRKRAW
FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH
FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNMFDN
FT EPSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE
FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN"
XX
SQ Sequence 1300 BP; 372 A; 259 C; 316 G; 353 T; 0 other;
AY562429 Length: 1300 October 5, 2004 10:03 Type: N Check: 9472 ..
1 accggttggc cccgcccccc tttaaacgtg gtcccccgca ctacgtatgt
51 cggccaatca tgttgtagct ttaaaggtta tgtattagtg gtgggccact
101 atatacttgc aggcgaagtt gtggctagtg cgcaatgtgg gatccactgg
151 tgaatgagtt tccagactcg gtgcatgggc ttaggtgtat gcttgcaatt
201 aaatatttgc aggccttaga ggatacatac gagcccagta ctttgggcca
251 cgatctggtt agggatctag tctcagttat tagggcgcgt aattatgtcg
301 aagcgaccag gagatatcat catttccact ccaggctcca aagttcgtcg
351 aagactgaac ttcgacagcc catacaggaa ccgtgctatt gcccccactg
401 tccacgtcac aaatcgaaaa cgggcctgga tgaacaggcc catgtacaga
451 aagcccatga tgtacaggat gtatagaagc ccagacatac ctaggggctg
501 tgaaggccca tgtaaggtcc agtcgtttga gcagagggat gatgtgaagc
551 accttggtat ctgtaaggtg attagtgatg tgacgcgtgg gcctgggctg
601 acacacaggg tcggaaagag gttttgtatc aagtccattt acattcttgg
651 taagatctgg atggatgaaa atattaagaa gcagaatcac actaataatg
701 tgattttcta cctgcttagg gatagaaggc cttatggcaa tgcgccccaa
751 gactttgggc agatatttaa catgtttgat aatgagccca gtactgcaac
801 aattaagaac gatttgaggg ataggtttca ggtgttgagg aaatttcatg
851 ccactgttgt tggtggtcca tctggcatga aggaacaggc gttggtgaaa
901 aggttttaca ggttgaatca tcacgtgaca tacaatcatc aggaggcagg
951 gaaatatgag aatcacacag agaatgcttt gcttctgtac atggcatgta
1001 ctcatgcctc caatcctgta tatgcgacgt tgaaaatacg tatatacttc
1051 tatgacagta ttggcaatta ataaacattg aattttattt catgagtcaa
1101 ctgacattca atagtgttgg caattacatt gaacaaaaca tgaccagcag
1151 ctctaattac attattaatt gagataacac ctatattatc caagtattta
1201 attacttggt atctaaagac ccttaagaaa agaccagtct gaggctgtaa
1251 ggtcgtccag atctggaagt tgagaaaaca tttgtgaatc cccagctcct