Sequence of DPV Mal de Rio Cuarto virus
Mal de Rio Cuarto virus segment S5, complete sequence.
ACC No: AY607587
Dated: 2005-05-28 | Length: 3162 | CRC: 1200988665
!!NA_SEQUENCE 1.0
ID AY607587 standard; genomic RNA; VRL; 3162 BP.
XX
AC AY607587;
XX
SV AY607587.1
XX
DT 28-MAY-2005 (Rel. 84, Created)
DT 28-MAY-2005 (Rel. 84, Last updated, Version 1)
XX
DE Mal de Rio Cuarto virus segment S5, complete sequence.
XX
KW .
XX
OS Mal de Rio Cuarto virus
OC Viruses; dsRNA viruses; Reoviridae; Fijivirus; Fijivirus group 2.
XX
RN [1]
RP 1-3162
RX PUBMED; 15747051.
RA Distefano A.J., Hopp H.E., del Vas M.;
RT "Sequence analysis of genome segments S5 and S10 of Mal de Rio Cuarto virus
RT (Fijivirus, Reoviridae)";
RL Arch. Virol. 150(6):1241-1248(2005).
XX
RN [2]
RP 1-3162
RA Distefano A.J., del Vas M.;
RT ;
RL Submitted (26-APR-2004) to the EMBL/GenBank/DDBJ databases.
RL Biotechnology Institute, INTA, Las Cabanas y Los Reseros s/n cc25,
RL Castelar, BsAs BWWA1712, Argentina
XX
FH Key Location/Qualifiers
FH
FT source 1. .3162
FT /country="Argentina"
FT /db_xref="taxon:185954"
FT /mol_type="genomic RNA"
FT /organism="Mal de Rio Cuarto virus"
FT /specific_host="Zea mays"
FT /segment="S5"
FT CDS 16. .2814
FT /codon_start=1
FT /product="pS5"
FT /protein_id="AAU08743.1"
FT /translation="MTFSKVKMTTETSEMSLKKVLFDPTNEIRILNHEEADNTLLVTMM
FT IIHEFADETTRSAMTPQIVKEKKIELDQTLSSIVETISSTFVDKYEEILKKNAELGNPL
FT SKHSRHVTSIKTCIPGLETLYVEKDKLDLLTKLYSIDKKASAKYPLTDLLQGKFFGIDI
FT DQQTLDGYTTVAIAILEIAVSILTIYSIYGGVIFSVLAVMSDNNTYIFTLGLILHGIVQ
FT AVKIYLQSRVEPKQVEMPTYVEKLKNDDIKDKLIENSMFVFVKRPEPSLFEKFEIDMKV
FT HTHKSSEIQSFKKGFSNLLPKLLRICEIKKDVEYVGYIDGITKDEMIGASGKKLSALER
FT RAIGTDYDQEKNILMISHPILRDVWKKLDEINLLENGLLSKANFAKIPDDLSTINFSDS
FT KILFEYISQFLANVDLRHAIQLSYNWKSAATEKRPYHYIKEGTSVNFYDPVFECFYPNH
FT FIKSVKRDAIIVDDSKFVSYAETESFGRYVDKHEDYLYSQTDAYSILKFLNDGHNSCGC
FT ADHFACFISDYLTSIDVLNHMKDSPLSKTEYHLRQEYENLFKKTKKFELSKVAIHEHSE
FT YLASLAYNEAFFNIDFCFLEDCDTHSIVIRFPKRKPYFRFKDDALEKLNVLSLYDFVIQ
FT CNHGDISTASRIGWNLVDLDNFGSDDAISKLGRRPSTKVRQFTYDLMMVTFVGSVTQYV
FT CPEWIGETLTMYEEKHEGSSLFEKSTLFSNMSCVQIADLHCYTLIECFNKSSNKLTSFM
FT EGIICAMSSDLEFSPFKNTVLNNLRRCTHTHDASNSKSVTSVLPGKHKSFRSFLRSSRS
FT SDVYDKIANCITRKQQGMFTRSEMCMHCDVGKFGKLGIDDDECDVQDLISNKEELYNNH
FT PCALRLRSVGHFVYGKHFRCKACRNNYRTSFELSLCQLGHQETAAETVRSNALTSQSRT
FT KF"
XX
SQ Sequence 3162 BP; 1024 A; 586 C; 582 G; 970 T; 0 other;
AY607587 Length: 3162 June 7, 2005 08:35 Type: N Check: 9215 ..
1 aagttttttt cactcatgac attttcgaaa gtaaagatga ccacagaaac
51 ttccgaaatg tctttgaaaa aagtgctctt tgacccaaca aacgaaataa
101 gaattttaaa ccatgaagaa gcagacaaca cactccttgt tacaatgatg
151 attattcacg aatttgctga tgaaactact cgttccgcaa tgacccccca
201 aatcgtaaaa gaaaagaaaa tcgaactcga ccaaacattg tcctcaattg
251 tagaaacgat cagttcaacg ttcgttgaca agtatgaaga aattttgaag
301 aaaaacgctg aattaggcaa tccactgtca aaacattcca gacatgttac
351 ttccatcaaa acttgcattc caggacttga aactctgtac gttgagaaag
401 ataaactaga cttgttaact aagttgtatt ctatcgacaa aaaagcaagt
451 gcgaaatatc ccttaaccga tttactacaa ggcaaatttt ttggaatcga
501 tatcgaccaa caaactcttg acggatacac aactgttgca atcgccattc
551 ttgaaattgc tgtttcaatt cttaccattt atagtattta cggtggagta
601 attttcagtg ttttagcagt catgtcagat aataatactt atattttcac
651 tttaggatta attttgcatg gtattgttca ggcagtaaag atatatttgc
701 aatcgcgtgt tgaaccgaaa caagttgaaa tgccaactta cgttgaaaag
751 ttgaaaaatg atgatattaa agacaagttg attgaaaata gtatgtttgt
801 atttgttaaa cgtccagaac cttcactttt tgaaaagttt gaaattgaca
851 tgaaggtgca tactcataaa tcatccgaaa ttcagtcatt caagaaagga
901 ttttcaaact tactacctaa attgttgcgt atttgcgaaa tcaagaaaga
951 cgttgaatat gtaggatata ttgatggaat tacaaaggat gaaatgatcg
1001 gtgcatcagg taagaaacta tcagcattgg aacgtcgtgc aattggaaca
1051 gattacgacc aagagaaaaa cattttgatg atcagtcacc ctattctccg
1101 tgatgtttgg aaaaagttag atgaaattaa tcttcttgaa aatggtttat
1151 tgtccaaggc gaattttgcc aagataccag atgatctgtc aactatcaat
1201 ttttcggatt caaagattct gttcgagtac atttctcaat ttctagcaaa
1251 tgttgatctt cgacatgcta ttcaactatc atataattgg aagagtgcag
1301 ctactgaaaa acgtccctat cattatatca aggaaggtac aagtgtgaat
1351 ttttatgatc ctgtgttcga atgtttctat cctaatcatt tcatcaagtc
1401 tgtgaaacga gatgctatca tagttgatga ctcaaaattc gttagctacg
1451 ctgaaactga aagctttggt agatacgttg ataaacatga agattactta
1501 tacagtcaaa ctgatgctta ttcaatcctt aaatttttga acgatggcca
1551 caactcatgt ggatgcgcag atcattttgc ttgtttcatt tctgattacc
1601 tgacatcaat tgacgtactg aaccacatga aggactcgcc attgagtaaa
1651 actgaatatc atcttcgtca ggaatacgaa aacttgttca agaaaacgaa
1701 aaaatttgag ttgtctaaag ttgcgattca tgaacattct gaataccttg
1751 caagcttagc atacaatgaa gcctttttca acattgattt ttgtttcctc
1801 gaagattgcg acacgcattc aattgtaatt cgatttccaa aacgtaaacc
1851 ttacttccgt ttcaaagatg atgcgttaga aaaattgaac gtactttcac
1901 tctacgattt tgtgattcag tgtaaccatg gtgacatttc aacagctagt
1951 cgaattggat ggaatctggt tgatcttgac aactttggat cagatgatgc
2001 tatttccaag ctcggacgtc gaccaagtac taaagttcgt caattcacat
2051 acgatttaat gatggtaaca tttgtcggtt cagtgactca atatgtttgc
2101 cctgaatgga ttggtgagac attgactatg tatgaagaaa aacacgaagg
2151 ttcatccctg tttgaaaaat ctactttgtt ttctaacatg agctgtgttc
2201 aaatcgctga cttgcattgc tacacattga ttgaatgctt taataagagt
2251 tctaataagt taacttcttt catggaaggt ataatttgcg caatgtcatc
2301 agatcttgaa ttttcacctt tcaaaaatac cgttttgaac aacctaagaa
2351 gatgtactca cactcatgac gcttccaact caaagtcagt tacttcggta
2401 ctacctggta aacataaatc ttttcgaagc ttcctacgat cttctcgatc
2451 aagtgacgtg tatgacaaaa ttgccaactg tatcacaagg aaacaacaag
2501 gaatgttcac acgctctgaa atgtgtatgc attgtgacgt cggaaagttt
2551 ggaaagttgg gaattgatga tgatgaatgt gacgtgcaag accttatctc
2601 aaacaaagaa gaactctaca ataatcatcc ctgtgcgcta cggcttagaa
2651 gtgtcggaca ttttgtctac ggaaaacatt ttagatgtaa agcatgtcgt
2701 aacaactaca gaactagctt cgagctttcc ctgtgtcaat tgggacatca
2751 agaaacagca gctgaaacag ttagatctaa cgcgcttact agccaatctc
2801 gaacaaaatt ttaactcatt atcgcgtgat gaccctcttc gttttcggta
2851 taactataac cacaccaatc ttcatatttt caatcgagta attgatagta
2901 acaaagacgt tatttctgat ctttttggtg atccgtatgc tatatctagt
2951 catgcaatta acaatgtatc tatcagtcca tcaatctcgt cagactctcg
3001 ccatactgaa cgagccaatc tgatcaaaca catgactttc ggaagtacgc
3051 taggagttat gctttgcgtt agagagaatg ttatccctgg ctgcaggcgg
3101 gggcgcgtta gccgcggggc gcgcgttcct tagatgcggg ggggagtgaa
3151 acagctattg tc