Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate Ir.n.3 major coat protein gene, partial cds.
ACC No: AY608509
Dated: 2005-12-11 | Length: 671 | CRC: -2074491002
ID AY608509 standard; genomic RNA; VRL; 671 BP. XX AC AY608509; XX SV AY608509.1 XX DT 23-JUN-2005 (Rel. 84, Created) DT 11-DEC-2005 (Rel. 86, Last updated, Version 2) XX DE Citrus tristeza virus isolate Ir.n.3 major coat protein gene, partial cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-671 RA Alavi V., Khatabi B., Salekdeh G.H.; RT "Comparison of biologically distinct isolates of Citrus tristeza virus from RT Iran using major coat protein sequences"; RL Australas. Plant Pathol. 34(4):577-582(2005). XX RN [2] RP 1-671 RA Khatabi B., Alavi S.V., Ghareyazie B., Bananej K., Salekdeh G.H.; RT ; RL Submitted (26-APR-2004) to the EMBL/GenBank/DDBJ databases. RL Proteomics, Agricultural Biotechnology (ABRII), Mahdasht Road, Karj, Tehran RL 31535-1897, Iran XX FH Key Location/Qualifiers FH FT source 1. .671 FT /country="Iran:northern" FT /db_xref="taxon:12162" FT /mol_type="genomic RNA" FT /organism="Citrus tristeza virus" FT /isolate="Ir.n.3" FT CDS 1. .>671 FT /codon_start=1 FT /db_xref="GOA:Q4QY45" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q4QY45" FT /product="major coat protein" FT /protein_id="AAT48096.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYVQAKEQLLKKRGADEVVVTMSGSLGNSTH FT V" XX SQ Sequence 671 BP; 194 A; 125 C; 173 G; 179 T; 0 other; ay608509 Length: 671 11-DEC-2005 Type: N Check: 7921 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaagtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 atatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgataa 351 actttggact gatgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccagcc ggataccatt acctgtgcgc agatttcttg accggagctg 551 gcttgactga cttggaatgt gctgtgtacg tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttactatgt caggcagctt 651 gggaaattca acacacgttg a