Sequence of DPV Gremmeniella mitovirus S2
Gremmeniella abietina mitochondrial RNA virus S2, complete genome.
ACC No: AY615209
Dated: 2005-04-28 | Length: 2587 | CRC: 1026874097
!!NA_SEQUENCE 1.0 ID AY615209 standard; genomic RNA; VRL; 2587 BP. XX AC AY615209; XX SV AY615209.1 XX DT 28-JUN-2004 (Rel. 80, Created) DT 28-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Gremmeniella abietina mitochondrial RNA virus S2, complete genome. XX KW . XX OS Gremmeniella abietina mitochondrial RNA virus S2 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Narnaviridae; OC Mitovirus. XX RN [1] RP 1-2587 RX PUBMED; 15845253. RA Tuomivirta T.T., Hantula J.; RT "Three unrelated viruses occur in a single isolate of Gremmeniella abietina RT var. abietina type A"; RL Virus Res. 110(1-2):31-39(2005). XX RN [2] RP 1-2587 RA Tuomivirta T.T., Hantula J.; RT ; RL Submitted (30-APR-2004) to the EMBL/GenBank/DDBJ databases. RL Forest Pathology, Finnish Forest Reseach Institute, Vantaa Research Center, RL Jokiniemenkuja 1, P.O.B. 18, Vantaa FIN-010301, Finland XX FH Key Location/Qualifiers FH FT source 1. .2587 FT /db_xref="taxon:279538" FT /mol_type="genomic RNA" FT /virion FT /organism="Gremmeniella abietina mitochondrial RNA virus FT S2" FT /isolate="SurS4" FT /specific_host="Gremmeniella abietina type A" FT CDS 269. .2494 FT /codon_start=1 FT /db_xref="GOA:Q6GYC2" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProt/TrEMBL:Q6GYC2" FT /transl_table=4 FT /product="putative RNA-dependent RNA polymerase" FT /protein_id="AAT48883.1" FT /translation="MNKNLFQIVIKLFVMIFLNTDVKLFVSLYFRCLTKHLKHHGVVST FT VKIFKQIRLHVTRYLCGSPLRTNSMMIGIDKDGWPKMINFLKPLANGTRSDKQLLLSIL FT FITRSFVEKDKSKLVPDWSTITQPRTTQKEYIIPSGFIKDWVLNNHLGTYKSEFDDSNH FT FVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVDYLTKIMNWTWLKDLGNKN FT NNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDRTFTQN FT PLNDWENNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPEIANSWQNLLVHREYARNG FT LNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCHINKFKDYIILGDDIVIHNDKVA FT KKYIEIMGKLGVGLSDSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIVLM FT NLYDFFKIKRNQYNFSGDILTMLLKLYQGLKIYKGDKSKKHYYLSLNRFKNLDIFLFAL FT NNTFGYSTYDHKRSFLISKEYSKDLPGPKIMQDLIXYVISTGLSNLTVESVNKSLKFVD FT TIIDNKSLLNIEDPNDLSNLPLFKGFQAYISNLRKTVEGWNNKSISLIEASRGLVQMDI FT LPIMKGSNRKILELQTIGKIYQNGIQEINNTDFEIFGSSQMIHPNESLGIQEGSSLNSF FT SSLSSSIDTNLVFIQNELNVIAKKNWMPPATEDSVADSYAAFAAMFN" XX SQ Sequence 2587 BP; 947 A; 400 C; 402 G; 837 T; 1 other; AY615209 Length: 2587 May 3, 2005 08:56 Type: N Check: 3644 .. 1 tggatatatg aagaattcga ccttcccacg cgtacgtgta aacagggcta 51 atcacccggc caagtataat tttcttggtc ccagttagca atactatgag 101 agtattctag atttcttcga gtgtcccttt tggttaattt ctgaaggctg 151 gaaactccaa ccgttggaaa taccctgcaa aagagctaag ttatagcatc 201 gtagataact ataatcgctc ttgggccgca agtcggctat gcggtacaac 251 cgttaagact taattattat gaacaaaaat ttatttcaaa tagtaattaa 301 actattcgta atgatatttt tgaacacaga tgttaagctc ttcgtatctc 351 tttattttag atgtttaact aaacatttaa aacaccacgg ggtagtgagt 401 acagtaaaaa tatttaaaca aataagatta catgttactc gttacctttg 451 tggatcacca ttgagaacaa actcaatgat gatagggata gataaagatg 501 gttgaccaaa aatgatcaat ttccttaaac cacttgctaa tggtacaaga 551 tcagataaac aattactttt atcaatcttg ttcattacaa gaagttttgt 601 ggaaaaagac aagagtaaac tagttcctga ctgaagtaca ataactcaac 651 cccgaacaac acaaaaggaa tatattattc cttctggatt tattaaggat 701 tgagtgttga acaatcattt aggaacttat aaaagtgagt ttgatgattc 751 aaatcatttt gtatcagtta agagtagtcc aactggacca tctacactga 801 ctgcactatg aggactatga aatcatagtt atgaatcatt taattgactt 851 tttaagatta ctagtttatc tggtgttgat tatcttacaa aaatcatgaa 901 ctggacttga ttaaaagacc taggaaataa aaataataat aaatgatcta 951 aacaattttt aggatcttta tcattaattt atgacccaga atgtaaagtt 1001 aggattgtag ctatgttaga ttatacaaca cagctatttc tccgacctat 1051 acataatgac ttgtttaaac ttcttaagaa gttaccacaa gataggactt 1101 ttacccaaaa tccattaaat gattgagaaa ataatgaaca ctcattttga 1151 tcaatcgacc ttaccgctgc aactgataga tttccaatta gtttacaacg 1201 tcggttatta ctatatatat atagtgatcc cgaaattgca aattcttgac 1251 aaaatctatt agtacataga gaatacgctc gtaatgggtt gaatccaatt 1301 aaatattcag ttggacaacc tatgggggcg tattcgtcct gacctgcttt 1351 cacattatct catcatcttg tcgttcattg atgtgcacat ttgtgtcata 1401 tcaataaatt caaagattat ataattcttg gtgacgatat cgttatacat 1451 aatgataaag ttgctaaaaa atatatagaa ataatgggaa agttaggagt 1501 gggtctatca gatagtaaaa ctcacgtatc gaaagataca tatgaatttg 1551 ctaaaagatg aatccataaa ggacaagaaa tatcgccatt acctattaca 1601 ggaattgtta ataatataac aaatccctat atagtattaa tgaatttata 1651 cgatttcttt aaaatcaaaa gaaaccagta taacttctca ggtgatatac 1701 taactatgtt attaaaatta taccaaggct taaaaatcta taagggagat 1751 aaaagtaaaa aacattatta cttatctcta aatagattta aaaatcttga 1801 tatattttta tttgcgctaa ataatacttt tggatattca acatatgatc 1851 acaaaagatc atttttgatt tccaaagagt acagtaagga tttaccggga 1901 ccaaaaataa tgcaagattt aatatyttac gtaattagta ctggtttatc 1951 taatcttact gtggaaagtg tgaataaatc attgaagttt gtagatacca 2001 taatagataa taaaagtcta ttaaatatcg aagaccctaa tgatttgtca 2051 aaccttccat tatttaaagg ttttcaagca tatatctcta atcttcgaaa 2101 gactgttgaa gggtgaaata ataaatcgat ttcacttatc gaagcctcaa 2151 gaggattagt ccaaatggat atacttccaa ttatgaaagg ttctaatagg 2201 aaaattttag aacttcaaac aattggtaaa atatatcaaa atggaataca 2251 agaaataaat aatactgatt ttgaaatctt tggttcttcc caaatgatac 2301 acccaaacga aagtttaggt attcaagaag gaagttcatt gaattcattc 2351 tcatcattat catctagtat agatactaac ttggttttta tccagaatga 2401 gttaaatgtt atagctaaga agaactgaat gcctcctgca actgaagatt 2451 cagttgcgga ttcatatgca gcctttgcag ctatgttcaa ttaatatcat 2501 taccgaatac agttgcaaat ctagatactc aaaaactata ttgagtctag 2551 actccaactg gggttttaca cttatgtgta aaacacc