Sequence of DPV Gremmeniella mitovirus S2
Gremmeniella abietina mitochondrial RNA virus S2, complete genome.
ACC No: AY615209
Dated: 2005-04-28 | Length: 2587 | CRC: 1026874097
!!NA_SEQUENCE 1.0
ID AY615209 standard; genomic RNA; VRL; 2587 BP.
XX
AC AY615209;
XX
SV AY615209.1
XX
DT 28-JUN-2004 (Rel. 80, Created)
DT 28-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Gremmeniella abietina mitochondrial RNA virus S2, complete genome.
XX
KW .
XX
OS Gremmeniella abietina mitochondrial RNA virus S2
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Narnaviridae;
OC Mitovirus.
XX
RN [1]
RP 1-2587
RX PUBMED; 15845253.
RA Tuomivirta T.T., Hantula J.;
RT "Three unrelated viruses occur in a single isolate of Gremmeniella abietina
RT var. abietina type A";
RL Virus Res. 110(1-2):31-39(2005).
XX
RN [2]
RP 1-2587
RA Tuomivirta T.T., Hantula J.;
RT ;
RL Submitted (30-APR-2004) to the EMBL/GenBank/DDBJ databases.
RL Forest Pathology, Finnish Forest Reseach Institute, Vantaa Research Center,
RL Jokiniemenkuja 1, P.O.B. 18, Vantaa FIN-010301, Finland
XX
FH Key Location/Qualifiers
FH
FT source 1. .2587
FT /db_xref="taxon:279538"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Gremmeniella abietina mitochondrial RNA virus
FT S2"
FT /isolate="SurS4"
FT /specific_host="Gremmeniella abietina type A"
FT CDS 269. .2494
FT /codon_start=1
FT /db_xref="GOA:Q6GYC2"
FT /db_xref="InterPro:IPR008686"
FT /db_xref="UniProt/TrEMBL:Q6GYC2"
FT /transl_table=4
FT /product="putative RNA-dependent RNA polymerase"
FT /protein_id="AAT48883.1"
FT /translation="MNKNLFQIVIKLFVMIFLNTDVKLFVSLYFRCLTKHLKHHGVVST
FT VKIFKQIRLHVTRYLCGSPLRTNSMMIGIDKDGWPKMINFLKPLANGTRSDKQLLLSIL
FT FITRSFVEKDKSKLVPDWSTITQPRTTQKEYIIPSGFIKDWVLNNHLGTYKSEFDDSNH
FT FVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVDYLTKIMNWTWLKDLGNKN
FT NNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDRTFTQN
FT PLNDWENNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPEIANSWQNLLVHREYARNG
FT LNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCHINKFKDYIILGDDIVIHNDKVA
FT KKYIEIMGKLGVGLSDSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIVLM
FT NLYDFFKIKRNQYNFSGDILTMLLKLYQGLKIYKGDKSKKHYYLSLNRFKNLDIFLFAL
FT NNTFGYSTYDHKRSFLISKEYSKDLPGPKIMQDLIXYVISTGLSNLTVESVNKSLKFVD
FT TIIDNKSLLNIEDPNDLSNLPLFKGFQAYISNLRKTVEGWNNKSISLIEASRGLVQMDI
FT LPIMKGSNRKILELQTIGKIYQNGIQEINNTDFEIFGSSQMIHPNESLGIQEGSSLNSF
FT SSLSSSIDTNLVFIQNELNVIAKKNWMPPATEDSVADSYAAFAAMFN"
XX
SQ Sequence 2587 BP; 947 A; 400 C; 402 G; 837 T; 1 other;
AY615209 Length: 2587 May 3, 2005 08:56 Type: N Check: 3644 ..
1 tggatatatg aagaattcga ccttcccacg cgtacgtgta aacagggcta
51 atcacccggc caagtataat tttcttggtc ccagttagca atactatgag
101 agtattctag atttcttcga gtgtcccttt tggttaattt ctgaaggctg
151 gaaactccaa ccgttggaaa taccctgcaa aagagctaag ttatagcatc
201 gtagataact ataatcgctc ttgggccgca agtcggctat gcggtacaac
251 cgttaagact taattattat gaacaaaaat ttatttcaaa tagtaattaa
301 actattcgta atgatatttt tgaacacaga tgttaagctc ttcgtatctc
351 tttattttag atgtttaact aaacatttaa aacaccacgg ggtagtgagt
401 acagtaaaaa tatttaaaca aataagatta catgttactc gttacctttg
451 tggatcacca ttgagaacaa actcaatgat gatagggata gataaagatg
501 gttgaccaaa aatgatcaat ttccttaaac cacttgctaa tggtacaaga
551 tcagataaac aattactttt atcaatcttg ttcattacaa gaagttttgt
601 ggaaaaagac aagagtaaac tagttcctga ctgaagtaca ataactcaac
651 cccgaacaac acaaaaggaa tatattattc cttctggatt tattaaggat
701 tgagtgttga acaatcattt aggaacttat aaaagtgagt ttgatgattc
751 aaatcatttt gtatcagtta agagtagtcc aactggacca tctacactga
801 ctgcactatg aggactatga aatcatagtt atgaatcatt taattgactt
851 tttaagatta ctagtttatc tggtgttgat tatcttacaa aaatcatgaa
901 ctggacttga ttaaaagacc taggaaataa aaataataat aaatgatcta
951 aacaattttt aggatcttta tcattaattt atgacccaga atgtaaagtt
1001 aggattgtag ctatgttaga ttatacaaca cagctatttc tccgacctat
1051 acataatgac ttgtttaaac ttcttaagaa gttaccacaa gataggactt
1101 ttacccaaaa tccattaaat gattgagaaa ataatgaaca ctcattttga
1151 tcaatcgacc ttaccgctgc aactgataga tttccaatta gtttacaacg
1201 tcggttatta ctatatatat atagtgatcc cgaaattgca aattcttgac
1251 aaaatctatt agtacataga gaatacgctc gtaatgggtt gaatccaatt
1301 aaatattcag ttggacaacc tatgggggcg tattcgtcct gacctgcttt
1351 cacattatct catcatcttg tcgttcattg atgtgcacat ttgtgtcata
1401 tcaataaatt caaagattat ataattcttg gtgacgatat cgttatacat
1451 aatgataaag ttgctaaaaa atatatagaa ataatgggaa agttaggagt
1501 gggtctatca gatagtaaaa ctcacgtatc gaaagataca tatgaatttg
1551 ctaaaagatg aatccataaa ggacaagaaa tatcgccatt acctattaca
1601 ggaattgtta ataatataac aaatccctat atagtattaa tgaatttata
1651 cgatttcttt aaaatcaaaa gaaaccagta taacttctca ggtgatatac
1701 taactatgtt attaaaatta taccaaggct taaaaatcta taagggagat
1751 aaaagtaaaa aacattatta cttatctcta aatagattta aaaatcttga
1801 tatattttta tttgcgctaa ataatacttt tggatattca acatatgatc
1851 acaaaagatc atttttgatt tccaaagagt acagtaagga tttaccggga
1901 ccaaaaataa tgcaagattt aatatyttac gtaattagta ctggtttatc
1951 taatcttact gtggaaagtg tgaataaatc attgaagttt gtagatacca
2001 taatagataa taaaagtcta ttaaatatcg aagaccctaa tgatttgtca
2051 aaccttccat tatttaaagg ttttcaagca tatatctcta atcttcgaaa
2101 gactgttgaa gggtgaaata ataaatcgat ttcacttatc gaagcctcaa
2151 gaggattagt ccaaatggat atacttccaa ttatgaaagg ttctaatagg
2201 aaaattttag aacttcaaac aattggtaaa atatatcaaa atggaataca
2251 agaaataaat aatactgatt ttgaaatctt tggttcttcc caaatgatac
2301 acccaaacga aagtttaggt attcaagaag gaagttcatt gaattcattc
2351 tcatcattat catctagtat agatactaac ttggttttta tccagaatga
2401 gttaaatgtt atagctaaga agaactgaat gcctcctgca actgaagatt
2451 cagttgcgga ttcatatgca gcctttgcag ctatgttcaa ttaatatcat
2501 taccgaatac agttgcaaat ctagatactc aaaaactata ttgagtctag
2551 actccaactg gggttttaca cttatgtgta aaacacc