Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate Yucatan 2000 coat protein gene, complete cds.
ACC No: AY649492
Dated: 2009-09-05 | Length: 672 | CRC: 1797320729
ID AY649492; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC AY649492; XX DT 21-JUL-2004 (Rel. 80, Created) DT 05-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Citrus tristeza virus isolate Yucatan 2000 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RC Publication Status: Online-Only RP 1-672 RX PUBMED; 19642988. RA Herrera-Isidron L., Ochoa-Sanchez J.C., Rivera-Bustamante R., RA Martinez-Soriano J.P.; RT "Sequence diversity on four ORFs of citrus tristeza virus correlates with RT pathogenicity"; RL Virol. J. 6:116-116(2009). XX RN [2] RP 1-672 RA Herrera-Isidron L., Hernandez-Valencia M.C., Sanchez-Briseno V., RA Iturriaga-Garciduenas D.R., Ochoa-Sanchez J.C., Rivera-Bustamante R., RA Martinez-Soriano J.P.; RT "Molecular analysis of Citrus tristeza virus isolates from Mexico"; RL Unpublished. XX RN [3] RP 1-672 RA Herrera-Isidron L., Hernandez-Valencia M.C., Sanchez-Briseno V., RA Iturriaga-Garciduenas D.R., Ochoa-Sanchez J.C., Rivera-Bustamante R., RA Martinez-Soriano J.P.; RT ; RL Submitted (09-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL Biotecnologia y Bioquimica, Centro de Investigacion y Estudios Avanzados, RL Km. 9.6 Lib. norte carr. Irapuato-Leon, Irapuato, Guanajuato 36500, Mexico XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="Yucatan 2000" FT /mol_type="genomic RNA" FT /country="Mexico:State of Yucatan" FT /isolation_source="field isolate collected in 2000 and FT preserved in Direccion General de Sanidad Vegetal, SAGARPA FT greenhouse" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q6DQW8" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q6DQW8" FT /protein_id="AAT74927.1" FT /translation="MDDETKKLKNKNKETKEGDEVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTDIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 200 A; 121 C; 169 G; 182 T; 0 other; ay649492 Length: 672 05-SEP-2009 Type: N Check: 3237 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgaa gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgatt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acggacataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattt aacacacgtt ga