Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 15-118 coat protein mRNA, complete cds.
ACC No: AY660009
Dated: 2005-04-16 | Length: 672 | CRC: -1941061720
!!NA_SEQUENCE 1.0 ID AY660009 standard; mRNA; VRL; 672 BP. XX AC AY660009; XX SV AY660009.1 XX DT 31-DEC-2004 (Rel. 82, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Citrus tristeza virus isolate 15-118 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Marques N., Bailey A., Niblett C.L., Nolasco G.; RT "Differentiation of Citrus tristeza virus (CTV) isolates by cleavase RT fragment length polymorphism (CFLP) analysis of the major coat protein RT gene"; RL Unpublished. XX RN [2] RP 1-672 RA Bonacalza B., Sequeira Z., Nolasco G.; RT ; RL Submitted (18-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL CDCTPV, Univ Algarve, Campus de Gambelas, Faro 8005-139, Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /country="Portugal:Madeira Island" FT /db_xref="taxon:12162" FT /mol_type="mRNA" FT /organism="Citrus tristeza virus" FT /isolate="15-118" FT CDS 1. .672 FT /codon_start=1 FT /db_xref="GOA:Q5ISG0" FT /db_xref="UniProt/TrEMBL:Q5ISG0" FT /product="coat protein" FT /protein_id="AAV74332.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT FT YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGGTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYLQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 123 C; 171 G; 181 T; 0 other; AY660009 Length: 672 April 19, 2005 08:51 Type: N Check: 3621 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag ctgagtcttc tttcggttcg ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ctgctttgaa tagagatttg tttcttacct tgaaagggaa 201 gtatcccaac ttacctgaca aagataaaga ctttcacata gctatgatgt 251 tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc 301 acgggtgtga cgtacactcg ggaaggtgtt gaagtggagt tgtctgacaa 351 actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt ggaactaacg atgcccttta tttggctttt 451 tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gcagtgtact tacaagctaa agagcaatta 601 ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga