Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate C271-2 clone 5 p23 (p23) gene, complete cds.

ACC No: AY750740

Dated: 2008-02-27 | Length: 633 | CRC: 1079809226

                
ID   AY750740; SV 1; linear; genomic RNA; STD; VRL; 633 BP.
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AC   AY750740;
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DT   30-SEP-2005 (Rel. 85, Created)
DT   27-FEB-2008 (Rel. 94, Last updated, Version 2)
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DE   Citrus tristeza virus isolate C271-2 clone 5 p23 (p23) gene, complete cds.
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KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-633
RX   PUBMED; 17999168.
RA   Iglesias N.G., Gago-Zachert S.P., Robledo G., Costa N., Plata M.I.,
RA   Vera O., Grau O., Semorile L.C.;
RT   "Population structure of Citrus tristeza virus from field Argentinean
RT   isolates";
RL   Virus Genes 36(1):199-207(2008).
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RN   [2]
RP   1-633
RA   Iglesias N.G.;
RT   ;
RL   Submitted (15-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL   Departamento de Ciencia y Tecnologia, Universidad Nacional de Quilmes,
RL   Roque Saenz Pena 180, Bernal, Buenos Aires 1876, Argentina
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FH   Key             Location/Qualifiers
FH
FT   source          1. .633
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="C271-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Argentina"
FT                   /clone="5"
FT                   /db_xref="taxon:12162"
FT   gene            1. .633
FT                   /gene="p23"
FT   CDS             1. .630
FT                   /codon_start=1
FT                   /gene="p23"
FT                   /product="p23"
FT                   /db_xref="InterPro:IPR006893"
FT                   /db_xref="UniProtKB/TrEMBL:Q3L2K1"
FT                   /protein_id="AAW82212.1"
FT                   /translation="MDDTSGQTFISVNLSDESNTASTEVKTVSSEAERLEFLRKMNPFV
FT                   IDALIRKTSYQGARFRARIIGVCVDCGRKHEKGSRTERKCKVNNTQSQNEVAHMLMHDP
FT                   VKYLSKRKARAFSNAEMFAIDLVMYTKERQLAVDLAAEREKTRLARKHPMRSPEETPEH
FT                   YKFGMTAKAMLPDINIVDVGDNEDTSSEYPVSLSVSGGVLREHHFI"
XX
SQ   Sequence 633 BP; 192 A; 123 C; 161 G; 157 T; 0 other;

ay750740 Length: 633  27-FEB-2008  Type: N  Check: 9208  ..

       1  atggacgata ctagcggaca aactttcatt tccgtgaacc tttctgatga
      51  aagcaacacg gctagtactg aagttaaaac cgtaagttct gaagcggagc
     101  gcttggaatt tttacggaaa atgaatccct ttgttattga tgctttgata
     151  cggaaaacca gttatcaggg tgctcgcttt cgcgcgagaa taataggagt
     201  gtgcgtggat tgtggtagaa aacacgaaaa ggggtcgagg actgaacgta
     251  agtgtaaggt caacaacaca cagtctcaga acgaggtggc gcatatgtta
     301  atgcacgatc ccgttaagta tttaagtaaa agaaaagcta gagccttttc
     351  taacgcggag atgtttgcga tcgatttggt tatgtacacc aaagaaaggc
     401  aattagcggt tgatttggcc gccgaaaggg aaaagacgag actggctcgt
     451  aaacacccaa tgcgttctcc ggaagaaact ccggaacatt ataaattcgg
     501  tatgactgct aaagcaatgt taccggacat caacatcgta gacgttggtg
     551  acaacgaaga cacttcgtcg gagtacccag taagtctgag tgtttctggc
     601  ggagttctcc gtgaacacca cttcatctga ttg