Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate C271-8 clone 3 p23 (p23) gene, complete cds.

ACC No: AY750741

Dated: 2008-02-27 | Length: 633 | CRC: 609166669

                
ID   AY750741; SV 1; linear; genomic RNA; STD; VRL; 633 BP.
XX
AC   AY750741;
XX
DT   30-SEP-2005 (Rel. 85, Created)
DT   27-FEB-2008 (Rel. 94, Last updated, Version 2)
XX
DE   Citrus tristeza virus isolate C271-8 clone 3 p23 (p23) gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-633
RX   PUBMED; 17999168.
RA   Iglesias N.G., Gago-Zachert S.P., Robledo G., Costa N., Plata M.I.,
RA   Vera O., Grau O., Semorile L.C.;
RT   "Population structure of Citrus tristeza virus from field Argentinean
RT   isolates";
RL   Virus Genes 36(1):199-207(2008).
XX
RN   [2]
RP   1-633
RA   Iglesias N.G.;
RT   ;
RL   Submitted (15-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL   Departamento de Ciencia y Tecnologia, Universidad Nacional de Quilmes,
RL   Roque Saenz Pena 180, Bernal, Buenos Aires 1876, Argentina
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .633
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="C271-8"
FT                   /mol_type="genomic RNA"
FT                   /country="Argentina"
FT                   /clone="3"
FT                   /db_xref="taxon:12162"
FT   gene            1. .633
FT                   /gene="p23"
FT   CDS             1. .630
FT                   /codon_start=1
FT                   /gene="p23"
FT                   /product="p23"
FT                   /db_xref="InterPro:IPR006893"
FT                   /db_xref="UniProtKB/TrEMBL:Q3L2K0"
FT                   /protein_id="AAW82213.1"
FT                   /translation="MDDTSGQTFVSVNLSDESNTASTAVRTVSSEADRLEFLRKMNPFI
FT                   LDALIRKNNYQGARFRARIIGVCVDCGRKHDKASRTERKCKVNNTQSQNEVAHMLMHDP
FT                   VKYLNKRKARAFSNAEMFAIDLVMHTKERQLAVDLAAEREKTRLARRHPMRSPEETPEH
FT                   YKFGITAKAMLPDINAVDVGDNEDTSSEYPVSLSVSDGVLREHHFI"
XX
SQ   Sequence 633 BP; 191 A; 124 C; 160 G; 158 T; 0 other;

ay750741 Length: 633  27-FEB-2008  Type: N  Check: 830  ..

       1  atggacgata ctagcggaca aactttcgtt tctgtgaacc tttctgacga
      51  aagcaacaca gcaagtactg cagttagaac cgtaagttcg gaagctgatc
     101  gcttggaatt tttacggaaa atgaatccct ttattctcga cgctttgata
     151  cggaaaaata attatcaagg cgctcgcttt cgcgcgagaa taataggagt
     201  gtgcgtggat tgtggtagaa aacacgataa ggcatcgagg actgaacgta
     251  agtgtaaggt caacaatacg cagtctcaga acgaggtggc gcatatgtta
     301  atgcacgatc ccgtaaaata tttaaataaa agaaaagcta gagccttttc
     351  taacgcagag atgtttgcaa tcgatttggt tatgcacacc aaggaaaggc
     401  aattagcggt tgatttggcc gctgaaaggg agaagacgag attggctcgt
     451  agacacccga tgcgttctcc ggaagagact ccggaacatt ataaattcgg
     501  tataactgct aaagcaatgt taccggacat caacgctgtg gacgttggtg
     551  ataacgagga cacttcgtcg gagtacccag tgagtctgag tgtttctgac
     601  ggagttctcc gtgaacacca cttcatctga ttg