Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate C257-2 clone 2 p23 (p23) gene, complete cds.

ACC No: AY750743

Dated: 2008-02-27 | Length: 633 | CRC: -146738681

                
ID   AY750743; SV 1; linear; genomic RNA; STD; VRL; 633 BP.
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AC   AY750743;
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DT   30-SEP-2005 (Rel. 85, Created)
DT   27-FEB-2008 (Rel. 94, Last updated, Version 2)
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DE   Citrus tristeza virus isolate C257-2 clone 2 p23 (p23) gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-633
RX   PUBMED; 17999168.
RA   Iglesias N.G., Gago-Zachert S.P., Robledo G., Costa N., Plata M.I.,
RA   Vera O., Grau O., Semorile L.C.;
RT   "Population structure of Citrus tristeza virus from field Argentinean
RT   isolates";
RL   Virus Genes 36(1):199-207(2008).
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RN   [2]
RP   1-633
RA   Iglesias N.G.;
RT   ;
RL   Submitted (15-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL   Departamento de Ciencia y Tecnologia, Universidad Nacional de Quilmes,
RL   Roque Saenz Pena 180, Bernal, Buenos Aires 1876, Argentina
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FH   Key             Location/Qualifiers
FH
FT   source          1. .633
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="C257-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Argentina"
FT                   /clone="2"
FT                   /db_xref="taxon:12162"
FT   gene            1. .633
FT                   /gene="p23"
FT   CDS             1. .630
FT                   /codon_start=1
FT                   /gene="p23"
FT                   /product="p23"
FT                   /db_xref="InterPro:IPR006893"
FT                   /db_xref="UniProtKB/TrEMBL:Q3L2J8"
FT                   /protein_id="AAW82215.1"
FT                   /translation="MDSTSGQTFVSVNLSDESNTASTAVETVNSEADRLEFLRKMNPFI
FT                   IDALVRKTNYQGARFRAKIIGVCVDCGRKHDKGLKTERKCKVNNTQSQNEVAHMLMHDP
FT                   VEYLNKGKARAFSKAEMFAIDLVMYTKEKQLAVNLAAEREKTRLARRHPMRSPEETPEH
FT                   YKFGMTAKAMLPDINAVDVGDNEDTSSEYPVSLSVSDGVLREHHFI"
XX
SQ   Sequence 633 BP; 193 A; 125 C; 159 G; 156 T; 0 other;

ay750743 Length: 633  27-FEB-2008  Type: N  Check: 9635  ..

       1  atggatagta ctagcggaca aactttcgtt tctgtgaacc tttctgacga
      51  aagcaacaca gcaagtactg cagtcgaaac cgtaaattcg gaagctgatc
     101  gcttggaatt tttacggaaa atgaacccct ttatcatcga cgctttggta
     151  cggaaaacca attatcaggg tgctcgcttt cgcgcaaaaa taataggagt
     201  gtgcgtggat tgtggtagaa aacacgataa gggattgaag accgaacgta
     251  agtgtaaggt caacaataca caatctcaaa acgaagtggc gcatatgtta
     301  atgcacgatc ccgttgaata tttaaataaa ggaaaggcta gagccttttc
     351  taaagcggag atgtttgcga ttgatttggt tatgtacacc aaggaaaagc
     401  agttggcggt taatttagcc gctgaaaggg agaagacgag actggctcgt
     451  agacacccga tgcgttctcc ggaagaaact ccggaacact ataaattcgg
     501  tatgactgct aaagcaatgt taccggacat caacgctgtg gacgttggtg
     551  ataacgagga cacttcgtcg gagtacccag tgagtctgag tgtttctgac
     601  ggagttctcc gcgaacacca cttcatctga ttg