Sequence of DPV Citrus tristeza virus
Citrus tristeza virus haplotype 446-6 coat protein (CP) gene, partial cds.
ACC No: AY791842
Dated: 2005-04-16 | Length: 669 | CRC: 845518023
!!NA_SEQUENCE 1.0 ID AY791842 standard; genomic RNA; VRL; 669 BP. XX AC AY791842; XX SV AY791842.1 XX DT 19-MAR-2005 (Rel. 83, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Citrus tristeza virus haplotype 446-6 coat protein (CP) gene, partial cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-669 RA Cerni S., Skoric D., Krajacik M., Gatin Z., Santos C., Martins V., RA Nolasco G.; RT "Occurrence of stem-pitting strains of Citrus tristeza virus in Croatia"; RL Plant Dis. 89:342-342(2005). XX RN [2] RP 1-669 RA Cerni S., Skoric D., Krajacik M., Santos C., Nolasco G.; RT ; RL Submitted (25-OCT-2004) to the EMBL/GenBank/DDBJ databases. RL FERN, Univ Algarve, Campus de Gambelas, Faro 8005-139, Portugal XX FH Key Location/Qualifiers FH FT source 1. .669 FT /country="Croatia" FT /db_xref="taxon:12162" FT /haplotype="446-6" FT /mol_type="genomic RNA" FT /organism="Citrus tristeza virus" FT /isolate="SwO stem pitting 446" FT /specific_host="Citrus unshiu" FT gene 1. .>669 FT /gene="CP" FT CDS 1. .>669 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q5C856" FT /gene="CP" FT /product="coat protein" FT /protein_id="AAX33771.1" FT /translation="MDDETKTLKNEIKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDADTTGIT FT YTREGVEVDLSDKLWTGVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 669 BP; 188 A; 128 C; 175 G; 178 T; 0 other; AY791842 Length: 669 April 19, 2005 08:50 Type: N Check: 3281 .. 1 atggacgacg aaacaaagac attgaagaac gaaatcaagg aaacgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaggtact 151 caacagaacg ccgctttgaa cagagactta ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga cgccgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact ggcgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccagcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga cttggaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgt