Sequence of DPV Citrus tristeza virus
Citrus tristeza virus haplotype 441-3 coat protein (CP) gene, partial cds.
ACC No: AY791843
Dated: 2005-04-16 | Length: 669 | CRC: 1663117933
!!NA_SEQUENCE 1.0 ID AY791843 standard; genomic RNA; VRL; 669 BP. XX AC AY791843; XX SV AY791843.1 XX DT 19-MAR-2005 (Rel. 83, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Citrus tristeza virus haplotype 441-3 coat protein (CP) gene, partial cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-669 RA Cerni S., Skoric D., Krajacik M., Gatin Z., Santos C., Martins V., RA Nolasco G.; RT "Occurrence of stem-pitting strains of Citrus tristeza virus in Croatia"; RL Plant Dis. 89:342-342(2005). XX RN [2] RP 1-669 RA Cerni S., Skoric D., Krajacik M., Santos C., Nolasco G.; RT ; RL Submitted (25-OCT-2004) to the EMBL/GenBank/DDBJ databases. RL FERN, Univ Algarve, Campus de Gambelas, Faro 8005-139, Portugal XX FH Key Location/Qualifiers FH FT source 1. .669 FT /country="Croatia" FT /db_xref="taxon:12162" FT /haplotype="441-3" FT /mol_type="genomic RNA" FT /organism="Citrus tristeza virus" FT /isolate="SwO stem pitting 441" FT /specific_host="Citrus wilsonii" FT gene 1. .>669 FT /gene="CP" FT CDS 1. .>669 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q5C855" FT /gene="CP" FT /product="coat protein" FT /protein_id="AAX33772.1" FT /translation="MDDETKTLKNKNKETKEGDDVVAAEFSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGIEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALHLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLRADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 669 BP; 191 A; 127 C; 175 G; 176 T; 0 other; AY791843 Length: 669 April 19, 2005 08:50 Type: N Check: 9867 .. 1 atggacgacg aaacaaagac attgaagaac aaaaacaagg agacgaaaga 51 aggcgacgat gttgttgcag cagagttttc tttcggttcc gtgaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggaacc 151 caacagaacg ccgcactgaa cagagacttg tttcttactc tgaaagggaa 201 gtatcctaac ttgcctgaca aggataagga tttccacata gctatgatgt 251 tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc 301 acgggtataa catatactcg ggagggtatt gaagtggatt tgtctgacaa 351 gctttggact gacgtcgtgt ttaactccaa gggtattggt aaccgtacta 401 atgcccttcg agtctggggt aggactaacg acgcccttca tttagctttc 451 tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg 501 gattccggct ggatatcatt acctacgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgt