Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate Jh major coat protein (CP25) gene, complete cds.

ACC No: AY803277

Dated: 2005-12-17 | Length: 672 | CRC: 466069306

                
ID   AY803277   standard; genomic RNA; VRL; 672 BP.
XX
AC   AY803277;
XX
SV   AY803277.1
XX
DT   11-NOV-2004 (Rel. 81, Created)
DT   17-DEC-2005 (Rel. 86, Last updated, Version 2)
XX
DE   Citrus tristeza virus isolate Jh major coat protein (CP25) gene, complete
DE   cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-672
RA   Barzegar A., Sohi H.H., Rahimian H.;
RT   "Comparative Sequence Analysis of Coat Protein Gene of Iranian Citrus
RT   tristeza virus Isolates";
RL   J. Phytopathol. 153(7-8):457-463(2005).
XX
RN   [2]
RP   1-672
RA   Barzegar A., Rahimian H., Hashemi Sohi H.;
RT   ;
RL   Submitted (13-OCT-2004) to the EMBL/GenBank/DDBJ databases.
RL   Plant Biotechnology, Nigeb, Tehran-Karaj Highway, Tehran 14155-6343, Iran
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /country="Iran"
FT                   /db_xref="taxon:12162"
FT                   /mol_type="genomic RNA"
FT                   /note="produced severe symptoms"
FT                   /virion
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="Jh"
FT                   /isolation_source="southern citrus groves"
FT   gene            1. .672
FT                   /gene="CP25"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /db_xref="GOA:Q5U715"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:Q5U715"
FT                   /gene="CP25"
FT                   /product="major coat protein"
FT                   /protein_id="AAV51215.1"
FT                   /translation="MDDEPKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 193 A; 126 C; 174 G; 179 T; 0 other;

ay803277 Length: 672  17-DEC-2005  Type: N  Check: 1143  ..

       1  atggacgacg aaccaaagaa attgaagaac aaaaacaagg aaacgaaaga
      51  aggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaacttac
     101  acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaggtacc
     151  caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa
     201  gtatcctaat ttgtctgata aagataaaga ctttcacata gctatgatgt
     251  tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacacc
     301  acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa
     351  actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgcacta
     401  acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt
     451  tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg
     501  gattccagcc gggtatcatt acctgtgtgc agatttcttg accggagctg
     551  gcttgactga tttggaatgt gctgtgtaca tacaagctaa agaacaattg
     601  ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga