Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate Kd major coat protein (CP25) gene, complete cds.
ACC No: AY803278
Dated: 2005-12-17 | Length: 672 | CRC: 195611067
ID AY803278 standard; genomic RNA; VRL; 672 BP. XX AC AY803278; XX SV AY803278.1 XX DT 11-NOV-2004 (Rel. 81, Created) DT 17-DEC-2005 (Rel. 86, Last updated, Version 2) XX DE Citrus tristeza virus isolate Kd major coat protein (CP25) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Barzegar A., Sohi H.H., Rahimian H.; RT "Comparative Sequence Analysis of Coat Protein Gene of Iranian Citrus RT tristeza virus Isolates"; RL J. Phytopathol. 153(7-8):457-463(2005). XX RN [2] RP 1-672 RA Barzegar A., Rahimian H., Hashemi Sohi H.; RT ; RL Submitted (13-OCT-2004) to the EMBL/GenBank/DDBJ databases. RL Plant Biotechnology, Nigeb, Tehran-Karaj Highway, Tehran 14155-6343, Iran XX FH Key Location/Qualifiers FH FT source 1. .672 FT /country="Iran:Fars Province, Khafr" FT /db_xref="taxon:12162" FT /mol_type="genomic RNA" FT /virion FT /organism="Citrus tristeza virus" FT /isolate="Kd" FT /isolation_source="southern citrus groves" FT gene 1. .672 FT /gene="CP25" FT CDS 1. .672 FT /codon_start=1 FT /db_xref="GOA:Q5U714" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q5U714" FT /gene="CP25" FT /product="major coat protein" FT /protein_id="AAV51216.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAVSSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDTGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 195 A; 126 C; 172 G; 179 T; 0 other; ay803278 Length: 672 17-DEC-2005 Type: N Check: 9997 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag cggtgtcttc tttcggttcc ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaggtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataaaga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa aggtatcggt aaccgcacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatacagg 501 gattccagcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttggaatgc gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga