Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone P16C minor coat protein (p27) gene, complete cds.
ACC No: AY896550
Dated: 2005-04-17 | Length: 723 | CRC: -1424239811
!!NA_SEQUENCE 1.0 ID AY896550 standard; genomic RNA; VRL; 723 BP. XX AC AY896550; XX SV AY896550.1 XX DT 14-FEB-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Citrus tristeza virus clone P16C minor coat protein (p27) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-723 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT "Characterization of trifoliate resistance-breaking isolates of Citrus RT tristeza virus"; RL Unpublished. XX RN [2] RP 1-723 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT ; RL Submitted (13-JAN-2005) to the EMBL/GenBank/DDBJ databases. RL School of Biological Sciences, University of Auckland, 3A Symonds Street, RL Auckland, New Zealand XX FH Key Location/Qualifiers FH FT source 1. .723 FT /country="New Zealand" FT /db_xref="taxon:12162" FT /mol_type="genomic RNA" FT /organism="Citrus tristeza virus" FT /isolate="NZ-16" FT /specific_host="Citrus aurantifolia" FT /clone="P16C" FT gene 1. .723 FT /gene="p27" FT CDS 1. .723 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q5EFC6" FT /gene="p27" FT /product="minor coat protein" FT /protein_id="AAW82050.1" FT /translation="MAGYTVLPKTDDKEMDPVSAAVPGKYPDVIEKFVTNRSVDALIES FT VISKLDTNSIYEDSTEKFTGEQLKYVMVTMDTFLLENYKTKTEDLLVHLAMIQKRLCTI FT STSTKTKFRDKGCISYVQGGLRYKLMDKVVFPFIISKFTDRETPNALRKYACTFEELHL FT CTARLRPDLYENKRTTKAGTPHLKGYLSADFLTGSLPGYSEHERGIILRASESMLARRQ FT GYEEATELLNLRDLGKYL" XX SQ Sequence 723 BP; 222 A; 133 C; 166 G; 202 T; 0 other; AY896550 Length: 723 April 26, 2005 08:33 Type: N Check: 8994 .. 1 atggcaggtt atacagtact tcctaaaact gacgacaaag aaatggatcc 51 ggtgagtgcc gctgtgcccg gtaaataccc ggacgttatc gaaaaatttg 101 tgaccaacag gtcagtagac gcgttaatag aaagcgttat tagcaagttg 151 gatactaatt caatatacga agattccact gaaaaattta ctggtgagca 201 gctgaagtac gtcatggtta ctatggacac tttcttacta gaaaattaca 251 aaacgaaaac ggaagatctg ctggttcact tggctatgat tcaaaagagg 301 ttgtgcacta tatctacgag tactaaaacc aagtttcgtg ataaaggttg 351 tatcagttat gtacaagggg gtttacgata taagttaatg gataaggtag 401 tttttccctt tattatatct aagtttactg acagggagac tccaaacgct 451 ctacgtaagt atgcttgtac gtttgaggag ttacacttgt gcacggctag 501 gttgagaccc gacttgtatg aaaacaaaag gacgaccaaa gctgggactc 551 cgcatttaaa gggctactta tcagctgact ttcttacggg ttccctccca 601 ggatattccg aacatgaacg gggtatcatt cttcgagcgt cagaatctat 651 gttagctaga cgtcaaggtt atgaggaagc aaccgagctt cttaacttac 701 gcgatttggg taagtactta tag