Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone P3A minor coat protein (p27) gene, complete cds.
ACC No: AY896554
Dated: 2005-04-17 | Length: 723 | CRC: -1058725312
!!NA_SEQUENCE 1.0 ID AY896554 standard; genomic RNA; VRL; 723 BP. XX AC AY896554; XX SV AY896554.1 XX DT 14-FEB-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Citrus tristeza virus clone P3A minor coat protein (p27) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-723 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT "Characterization of trifoliate resistance-breaking isolates of Citrus RT tristeza virus"; RL Unpublished. XX RN [2] RP 1-723 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT ; RL Submitted (13-JAN-2005) to the EMBL/GenBank/DDBJ databases. RL School of Biological Sciences, University of Auckland, 3A Symonds Street, RL Auckland, New Zealand XX FH Key Location/Qualifiers FH FT source 1. .723 FT /country="New Zealand" FT /db_xref="taxon:12162" FT /mol_type="genomic RNA" FT /note="trifoliate orange resistance breaking phenotype" FT /organism="Citrus tristeza virus" FT /isolate="NZRB-3" FT /specific_host="Citrus aurantifolia" FT /clone="P3A" FT gene 1. .723 FT /gene="p27" FT CDS 1. .723 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q5EFC2" FT /gene="p27" FT /product="minor coat protein" FT /protein_id="AAW82054.1" FT /translation="MAGYTVLPKVDDKEMDPVSAAVPGKYPDVIEKFVTNRSVDALIEG FT VISKLDTNSIYEDSTEKFTGEQLKYVMVTMDTFLLENYKTKTEDLLVHLAMIQKRLCTI FT STSTKTKFRDKGCISYVQGGLRYKLFDKVVFPFIISKFTDRETPNALRKYACTFEELHL FT CMARLRPDLYENKRTTKAGTPHLKGYLSADFLTGSLPGYSEHERGIILRASESMLARRQ FT GYEEATELLNLRDLGKYL" XX SQ Sequence 723 BP; 224 A; 134 C; 161 G; 204 T; 0 other; AY896554 Length: 723 April 26, 2005 08:33 Type: N Check: 106 .. 1 atggcaggtt atacagtact tcccaaagtt gatgacaaag aaatggatcc 51 agtaagtgct gctgtacccg gcaaataccc ggacgtcatc gaaaaatttg 101 tgactaatag gtcggtagac gcgctaatag aaggcgttat aagcaagttg 151 gacaccaatt cgatatacga agattccact gaaaaattta ctggtgagca 201 actgaagtat gttatggtta ctatggatac tttcttatta gaaaattaca 251 aaacgaaaac ggaagatcta ctggttcatc tggctatgat tcagaagagg 301 ttgtgcacta tatccacgag tactaaaacc aaatttcgtg ataagggttg 351 tattagttat gtacaagggg gtttacggta taagttattc gataaagtag 401 tttttccctt tattatatcc aagtttaccg acagggagac cccaaacgct 451 ctacgtaagt atgcttgtac ctttgaggag ttacacttgt gtatggctag 501 attaagaccc gacctatacg aaaacaaaag gacaaccaaa gctggaactc 551 cgcatttaaa aggctacttg tcagctgatt ttcttacggg ttctcttcca 601 ggatactccg aacatgaacg gggtatcatt cttcgagcgt ctgaatctat 651 gttagctaga cgtcaaggtt acgaggaggc gaccgagctt cttaacttac 701 gcgatttggg taagtactta tag