Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone C12B coat protein (p25) gene, complete cds.
ACC No: AY896556
Dated: 2005-04-17 | Length: 672 | CRC: -1501713409
!!NA_SEQUENCE 1.0 ID AY896556 standard; genomic RNA; VRL; 672 BP. XX AC AY896556; XX SV AY896556.1 XX DT 14-FEB-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Citrus tristeza virus clone C12B coat protein (p25) gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT "Characterization of trifoliate resistance-breaking isolates of Citrus RT tristeza virus"; RL Unpublished. XX RN [2] RP 1-672 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT ; RL Submitted (13-JAN-2005) to the EMBL/GenBank/DDBJ databases. RL School of Biological Sciences, University of Auckland, 3A Symonds Street, RL Auckland, New Zealand XX FH Key Location/Qualifiers FH FT source 1. .672 FT /db_xref="taxon:12162" FT /mol_type="genomic RNA" FT /note="trifoliate orange resistance breaking phenotype" FT /organism="Citrus tristeza virus" FT /isolate="NZRB-12" FT /specific_host="Citrus sinensis" FT /clone="C12B" FT gene 1. .672 FT /gene="p25" FT CDS 1. .672 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q5EFC0" FT /gene="p25" FT /product="coat protein" FT /protein_id="AAW82056.1" FT /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDATGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 198 A; 129 C; 165 G; 180 T; 0 other; AY896556 Length: 672 April 26, 2005 08:33 Type: N Check: 943 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacaat gttgttgccg ctgagtcttc tttcggttcc ttaaacttac 101 acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta tttcttactc tgaaagggaa 201 gcatcctaac ttacctgaca aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgatgct 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaaa atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggagctga tgaagttgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga