Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone C5D coat protein (p25) gene, complete cds.
ACC No: AY896561
Dated: 2005-04-17 | Length: 672 | CRC: 1110516949
!!NA_SEQUENCE 1.0 ID AY896561 standard; genomic RNA; VRL; 672 BP. XX AC AY896561; XX SV AY896561.1 XX DT 14-FEB-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Citrus tristeza virus clone C5D coat protein (p25) gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT "Characterization of trifoliate resistance-breaking isolates of Citrus RT tristeza virus"; RL Unpublished. XX RN [2] RP 1-672 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT ; RL Submitted (13-JAN-2005) to the EMBL/GenBank/DDBJ databases. RL School of Biological Sciences, University of Auckland, 3A Symonds Street, RL Auckland, New Zealand XX FH Key Location/Qualifiers FH FT source 1. .672 FT /db_xref="taxon:12162" FT /mol_type="genomic RNA" FT /note="trifoliate orange resistance breaking phenotype" FT /organism="Citrus tristeza virus" FT /isolate="NZRB-5" FT /specific_host="Citrus aurantifolia" FT /clone="C5D" FT gene 1. .672 FT /gene="p25" FT CDS 1. .672 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q5EFB5" FT /gene="p25" FT /product="coat protein" FT /protein_id="AAW82061.1" FT /translation="MDDETKKLKNKNKEVKEGDDVVAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 188 A; 120 C; 179 G; 185 T; 0 other; AY896561 Length: 672 April 26, 2005 08:33 Type: N Check: 5795 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aagtgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacatcgtgt ttaattctaa gggtatcggt aaccgtgcta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaga atcgcaattt gagttatggc gggcgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga