Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone C9D coat protein (p25) gene, complete cds.
ACC No: AY896569
Dated: 2005-04-17 | Length: 672 | CRC: -705176828
!!NA_SEQUENCE 1.0 ID AY896569 standard; genomic RNA; VRL; 672 BP. XX AC AY896569; XX SV AY896569.1 XX DT 14-FEB-2005 (Rel. 82, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Citrus tristeza virus clone C9D coat protein (p25) gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT "Characterization of trifoliate resistance-breaking isolates of Citrus RT tristeza virus"; RL Unpublished. XX RN [2] RP 1-672 RA Harper S.J., Pearson M.N., Mooney P.A., Dawson T.E.; RT ; RL Submitted (13-JAN-2005) to the EMBL/GenBank/DDBJ databases. RL School of Biological Sciences, University of Auckland, 3A Symonds Street, RL Auckland, New Zealand XX FH Key Location/Qualifiers FH FT source 1. .672 FT /db_xref="taxon:12162" FT /mol_type="genomic RNA" FT /note="trifoliate orange resistance breaking phenotype" FT /organism="Citrus tristeza virus" FT /isolate="NZRB-9" FT /specific_host="Poncirus trifoliata" FT /clone="C9D" FT gene 1. .672 FT /gene="p25" FT CDS 1. .672 FT /codon_start=1 FT /db_xref="UniProt/TrEMBL:Q5EFA7" FT /gene="p25" FT /product="coat protein" FT /protein_id="AAW82069.1" FT /translation="MDDETKKLKNKNKEVKEGDDVVAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 189 A; 121 C; 178 G; 184 T; 0 other; AY896569 Length: 672 April 26, 2005 08:33 Type: N Check: 5258 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aagtgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacatcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc ggatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga