Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone JX-2-17 coat protein gene, complete cds.
ACC No: AY953981
Dated: 2008-08-24 | Length: 672 | CRC: -1855014593
ID AY953981; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC AY953981; XX DT 28-MAR-2006 (Rel. 87, Created) DT 24-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Citrus tristeza virus clone JX-2-17 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18626763. RA Jiang B., Hong N., Wang G.P., Hu J., Zhang J.K., Wang C.X., Liu Y., RA Fan X.D.; RT "Characterization of Citrus tristeza virus strains from southern China RT based on analysis of restriction patterns and sequences of their coat RT protein genes"; RL Virus Genes 37(2):185-192(2008). XX RN [2] RP 1-672 RA Zhang J., Hong N., Wang G.; RT ; RL Submitted (05-MAR-2005) to the EMBL/GenBank/DDBJ databases. RL Department of Plant Protection, Huazhong Agricultural University, No.1 RL Shizishan, Wuhan, Hubei 430062, China XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /mol_type="genomic RNA" FT /country="China" FT /clone="JX-2-17" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q9DTF8" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q9DTF8" FT /protein_id="AAX55222.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 191 A; 127 C; 176 G; 178 T; 0 other; ay953981 Length: 672 24-AUG-2008 Type: N Check: 2257 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcgg cggagtcttc tttcggttcc ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtacgtca gttaggtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataagga ctttcaccta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcac tgcaaagtga cgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaggtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga