Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone HN-K coat protein gene, complete cds.
ACC No: AY953982
Dated: 2008-08-24 | Length: 672 | CRC: 1682488215
ID AY953982; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC AY953982; XX DT 28-MAR-2006 (Rel. 87, Created) DT 24-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Citrus tristeza virus clone HN-K coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18626763. RA Jiang B., Hong N., Wang G.P., Hu J., Zhang J.K., Wang C.X., Liu Y., RA Fan X.D.; RT "Characterization of Citrus tristeza virus strains from southern China RT based on analysis of restriction patterns and sequences of their coat RT protein genes"; RL Virus Genes 37(2):185-192(2008). XX RN [2] RP 1-672 RA Zhang J., Hong N., Wang G.; RT ; RL Submitted (05-MAR-2005) to the EMBL/GenBank/DDBJ databases. RL Department of Plant Protection, Huazhong Agricultural University, No.1 RL Shizishan, Wuhan, Hubei 430062, China XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /mol_type="genomic RNA" FT /country="China" FT /clone="HN-K" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q1XAM7" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q1XAM7" FT /protein_id="AAX55223.1" FT /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKEKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCGQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 190 A; 121 C; 177 G; 184 T; 0 other; ay953982 Length: 672 24-AUG-2008 Type: N Check: 4705 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacaat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagagaa 201 gtatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgatgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtggacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc ggatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga