Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate C315-5 p20 gene, complete cds.

ACC No: AY962347

Dated: 2005-09-30 | Length: 557 | CRC: 2120750039

                !!NA_SEQUENCE 1.0
ID   AY962347   standard; genomic RNA; VRL; 557 BP.
XX
AC   AY962347;
XX
SV   AY962347.1
XX
DT   30-SEP-2005 (Rel. 85, Created)
DT   30-SEP-2005 (Rel. 85, Last updated, Version 1)
XX
DE   Citrus tristeza virus isolate C315-5 p20 gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-557
RA   Iglesias N.G., Riquelme K., Marengo J.M., Costa N.B., Plata M.I.,
RA   Semorile L.C.;
RT   "Genetic structure of Citrus tristeza virus (CTV) populations from field
RT   Argentinian isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-557
RA   Iglesias N.G., Riquelme K., Marengo J.M., Semorile L.C.;
RT   ;
RL   Submitted (14-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Ciencia y Tecnologia, Universidad Nacional de Quilmes, Roque Saenz Pena
RL   180, Bernal, Buenos Aires 1876, Argentina
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .557
FT                   /country="Argentina"
FT                   /db_xref="taxon:12162"
FT                   /mol_type="genomic RNA"
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="C315-5"
FT   CDS             6. .554
FT                   /codon_start=1
FT                   /product="p20"
FT                   /protein_id="AAY29179.1"
FT                   /translation="MRAYFSVNDYISLLAKVGAVVERLYDPSVTLTEVMDEINDFNSFL
FT                   ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRILLDIIRRRFTREKLLCTSAVD
FT                   VMGFFVMRYMSSSHTSFESVMRTELKLVVKVVLSDLSRAHKLDFSERAFAAYGILLQKG
FT                   TVSTVCGQFDINLVSPSCV"
XX
SQ   Sequence 557 BP; 136 A; 107 C; 144 G; 170 T; 0 other;

 AY962347  Length: 557  October 4, 2005 08:50  Type: N  Check: 6247  ..

       1  acaatatgcg agcttacttt agtgttaacg attacataag ccttttggct
      51  aaggtcggcg cagttgtgga acgtttgtac gatcccagcg taactctcac
     101  ggaagtgatg gacgaaatta atgattttaa ctcgtttctc gctttagtac
     151  actctatgaa gtcagacatg aacggtgatc atcaggatgg tcaccatgag
     201  atgggtgaac acaagtctcg attgttgtgc aatatagagg cgaaactgcg
     251  aatacttctc gacatcataa ggcgtcggtt cactcgcgaa aagctgcttt
     301  gtaccagtgc ggtagatgtc atgggctttt tcgttatgag gtacatgagc
     351  tccagccaca ctagcttcga gtctgtaatg agaacagagt tgaagttagt
     401  agttaaggtg gtactgtcgg atctgtcccg tgcgcataag ttggatttta
     451  gcgagcgagc ttttgctgct tacggtatcc ttttgcaaaa gggtactgtg
     501  tcgaccgttt gcggtcagtt tgacattaat ttagtgtctc catcttgcgt
     551  gtaggtt