Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate C315-14 clone J3 p23 gene, complete cds.

ACC No: AY962350

Dated: 2006-03-31 | Length: 633 | CRC: -2097348191

                
ID   AY962350   standard; genomic RNA; VRL; 633 BP.
XX
AC   AY962350;
XX
SV   AY962350.1
XX
DT   31-MAR-2006 (Rel. 87, Created)
DT   31-MAR-2006 (Rel. 87, Last updated, Version 1)
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DE   Citrus tristeza virus isolate C315-14 clone J3 p23 gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-633
RA   Iglesias N.G., Marengo J.M., Riquelme K.L., Costa N.B., Plata M.I.,
RA   Semorile L.C.;
RT   "Characterization of the population structure in a grapefruit isolate of
RT   Citrus tristeza virus (CTV) selected for pre-immunization assays in
RT   Argentina";
RL   Unpublished.
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RN   [2]
RP   1-633
RA   Iglesias N.G., Marengo J.M., Riquelme K.L., Costa N.B., Plata M.I.,
RA   Semorile L.C.;
RT   ;
RL   Submitted (14-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Ciencia y Tecnologia, Universidad Nacional de Quilmes, Roque Saenz Pena
RL   180, Bernal, Buenos Aires 1876, Argentina
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FH   Key             Location/Qualifiers
FH
FT   source          1. .633
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="C315-14"
FT                   /mol_type="genomic RNA"
FT                   /country="Argentina"
FT                   /clone="J3"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .630
FT                   /codon_start=1
FT                   /product="p23"
FT                   /protein_id="AAY29182.1"
FT                   /translation="MDDTSGQTFISVNLSDESNTASTEVKTVSSEADRLEFLRKMNPFI
FT                   IDALIRKTSYQGARFRARIIGVCVDCGRKHEKGSRTERKCKVNNTQSQNEVAHMLMHDP
FT                   VEYLSKRKARAFSNAEMFAIDLVMYTKERQLAVDLAAEREKTRLARKHPMRSPEETPEH
FT                   YKFGMTAKAMLPDVNVVDVGDNEDTSSEYPVSLRVSGGVLREHHFI"
XX
SQ   Sequence 633 BP; 190 A; 122 C; 163 G; 158 T; 0 other;

ay962350 Length: 633  31-MAR-2006  Type: N  Check: 180  ..

       1  atggatgata ctagcggaca aacttttatt tccgtgaacc tttctgacga
      51  aagcaacacg gctagtactg aagttaaaac cgtaagttct gaagcggatc
     101  gtttggaatt tttacggaaa atgaatccct ttattatcga cgctttgata
     151  cggaaaacca gttatcaggg tgctcgcttt cgcgcgagaa taataggagt
     201  gtgcgtggat tgtggtagaa aacacgaaaa ggggtcgagg actgaacgta
     251  agtgtaaggt caacaacaca cagtctcaga acgaggtggc gcatatgtta
     301  atgcacgatc ccgttgagta tttaagtaag agaaaagcta gagccttttc
     351  taacgcggag atgtttgcga tcgatttggt tatgtacacc aaagaaaggc
     401  aattagcggt tgatttggcc gctgaaaggg aaaagacgag actggctcgt
     451  aaacacccaa tgcgttctcc ggaagaaact ccggaacatt ataaattcgg
     501  tatgactgct aaagcaatgt taccggacgt caacgtcgta gacgttggcg
     551  acaacgaaga tacttcgtcg gagtacccag taagtctgag agtttctggc
     601  ggagttctcc gtgaacacca cttcatctga ttg