Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate C315-14 clone J12 p23 gene, complete cds.

ACC No: AY962356

Dated: 2006-03-31 | Length: 633 | CRC: 220830699

                
ID   AY962356   standard; genomic RNA; VRL; 633 BP.
XX
AC   AY962356;
XX
SV   AY962356.1
XX
DT   31-MAR-2006 (Rel. 87, Created)
DT   31-MAR-2006 (Rel. 87, Last updated, Version 1)
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DE   Citrus tristeza virus isolate C315-14 clone J12 p23 gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-633
RA   Iglesias N.G., Marengo J.M., Riquelme K.L., Costa N.B., Plata M.I.,
RA   Semorile L.C.;
RT   "Characterization of the population structure in a grapefruit isolate of
RT   Citrus tristeza virus (CTV) selected for pre-immunization assays in
RT   Argentina";
RL   Unpublished.
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RN   [2]
RP   1-633
RA   Iglesias N.G., Marengo J.M., Riquelme K.L., Costa N.B., Plata M.I.,
RA   Semorile L.C.;
RT   ;
RL   Submitted (14-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Ciencia y Tecnologia, Universidad Nacional de Quilmes, Roque Saenz Pena
RL   180, Bernal, Buenos Aires 1876, Argentina
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FH   Key             Location/Qualifiers
FH
FT   source          1. .633
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="C315-14"
FT                   /mol_type="genomic RNA"
FT                   /country="Argentina"
FT                   /clone="J12"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .630
FT                   /codon_start=1
FT                   /product="p23"
FT                   /protein_id="AAY29188.1"
FT                   /translation="MDDTSGQTFISVNLSDESNTASTEVKTVSSEADRLEFLRKMNPFV
FT                   IDALIRKTSYQGARFRARIIGVCVDCGGKHEKGSRTERKCKVNNTQSQNEVAHMLMHDP
FT                   VKYLNKRKARAFSNAEMFAIELVLYTKERQLAVDLAAEREKTRLARKHPMRSPEETPEH
FT                   YKFGMTAKAMLPDVNVVDVGDNEDTSSEYPVSLSISGGVLREHHFI"
XX
SQ   Sequence 633 BP; 192 A; 120 C; 160 G; 161 T; 0 other;

ay962356 Length: 633  31-MAR-2006  Type: N  Check: 949  ..

       1  atggatgata ctagcggaca aacttttatt tccgtgaacc tttctgacga
      51  aagcaacacg gctagtactg aagttaaaac cgtaagttct gaagcggatc
     101  gtttggaatt tttacggaaa atgaatccct ttgttattga tgctttgata
     151  cggaaaacca gttatcaggg tgctcgcttt cgcgcgagaa taataggagt
     201  gtgcgtggat tgtggtggaa aacacgaaaa ggggtcgagg actgaacgta
     251  agtgtaaggt caacaacaca cagtctcaga acgaggtggc gcatatgtta
     301  atgcacgatc ccgttaaata tttaaacaaa agaaaggcta gagccttttc
     351  taacgcagag atgtttgcga ttgaattggt tttgtacacc aaagaaaggc
     401  aattagcggt tgatttggcc gctgaaaggg aaaagacgag actggctcgt
     451  aaacacccaa tgcgttctcc ggaagaaact ccggaacatt ataaattcgg
     501  tatgactgct aaagcaatgt taccggacgt caacgtcgta gacgttggcg
     551  acaacgaaga tacttcgtcg gagtacccag taagtctgag tatttctggc
     601  ggagttctcc gtgaacacca cttcatctga ttg