Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate Ir. n. 5 minor coat protein gene, complete cds.
ACC No: AY966460
Dated: 2006-08-08 | Length: 878 | CRC: 1228434122
ID AY966460; SV 1; linear; genomic RNA; STD; VRL; 878 BP. XX AC AY966460; XX DT 01-MAY-2005 (Rel. 83, Created) DT 08-AUG-2006 (Rel. 88, Last updated, Version 2) XX DE Citrus tristeza virus isolate Ir. n. 5 minor coat protein gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-878 RA Khatabi B., Alavi S.V., Rastgou M., Salekdeh G.H.; RT "Complete sequence of minor coat protein (P27) gene of Iranian isolates of RT Citrus tristeza virus"; RL Unpublished. XX RN [2] RP 1-878 RA Khatabi B., Alavi S.V., Rastgou M., Salekdeh G.H.; RT ; RL Submitted (18-MAR-2005) to the EMBL/GenBank/DDBJ databases. RL Proteomics, Agricultural Biotechnology Research Institute of Iran (ABRII), RL Mahdasht Road, Karaj, Tehran 31535-1897, Iran XX FH Key Location/Qualifiers FH FT source 1. .878 FT /organism="Citrus tristeza virus" FT /isolate="Ir. n. 5" FT /mol_type="genomic RNA" FT /country="Iran" FT /db_xref="taxon:12162" FT CDS 47. .769 FT /codon_start=1 FT /product="minor coat protein" FT /note="P27" FT /db_xref="GOA:Q52SL2" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q52SL2" FT /protein_id="AAX94044.1" FT /translation="MAGYTMLPKTDDKEMNPVSAAVPGKYPDVIEKFVTNRSVDALIEG FT VISKLDTNSIYEDSTEKFTGEQLKYVMVTMDTFLLENYKTKTEDLLVHLAMIQKRLCTI FT STSTKTKFRDKGCISYVQGGLRYKLMDKVVFPFIISKFTDRETPNALRKYACTFEELHL FT CMARLRPDLYENKRTTKAGTPHLKGYLSADFLTGSLPGYSEHERGIILRASESMLARRQ FT GYEEATELLNLRDLGKYL" XX SQ Sequence 878 BP; 262 A; 164 C; 202 G; 250 T; 0 other; ay966460 Length: 878 08-AUG-2006 Type: N Check: 8222 .. 1 atgagcagag acgtggcaac atccggtttt aatttaccct ttcatcatgg 51 cgggttacac gatgcttccc aaaactgatg acaaagaaat gaacccggtg 101 agtgccgctg tgcccggtaa atacccggac gttatcgaaa aatttgtgac 151 caataggtcg gtagatgcgt taatagaagg tgttattagc aagttggata 201 ctaattcaat atacgaagat tccactgaaa aatttactgg tgagcaattg 251 aagtacgtca tggttactat ggacactttc ttactagaaa attacaaaac 301 gaaaacggaa gatctgctgg ttcacttggc tatgattcaa aagaggttgt 351 gcactatatc tacgagtact aaaaccaaat ttcgtgataa aggttgtatc 401 agttacgtgc aagggggttt acgatataag ttaatggata aggtagtttt 451 tcctttcatt atatctaagt ttactgacag ggagactcca aacgctctac 501 gtaagtatgc ttgtactttt gaggagttac acttgtgcat ggctaggctg 551 agacccgact tatacgaaaa caaaaggacg accaaagctg ggactccgca 601 tttaaaaggc tacttatcag ctgattttct tacgggttcc ctcccaggat 651 actccgaaca tgaacgaggt atcatccttc gagcgtctga atctatgtta 701 gctagacgtc aaggttacga ggaggcaacc gagcttctta acttacgcga 751 tttgggaaag tatttgtagt tggtttgcgg acggtggtat tacgccatcc 801 catgagcact gctttaaggg tcgttaattg acgactcttg atatttacta 851 agtttgaatt atggacgacg aaacaaag