Sequence of DPV Cucumber mosaic virus satellite RNA

Cucumber mosaic virus satellite RNA genomic RNA, complete genome, clone: CMVRaSAT.

ACC No: D00541

Dated: 2007-12-21 | Length: 338 | CRC: -1613722982

                ID   D00541; SV 1; linear; genomic RNA; STD; VRL; 338 BP.
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AC   D00541;
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DT   05-MAR-1991 (Rel. 27, Created)
DT   21-DEC-2007 (Rel. 94, Last updated, Version 7)
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DE   Cucumber mosaic virus satellite RNA genomic RNA, complete genome, clone:
DE   CMVRaSAT.
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KW   .
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OS   Cucumber mosaic virus satellite RNA
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded RNA satellites;
OC   Small linear single stranded RNA satellites.
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RN   [1]
RP   1-338
RX   PUBMED; 2794979.
RA   Devic M., Jaegle M., Baulcombe D.;
RT   "Symptom production on tobacco and tomato is determined by two distinct
RT   domains of the satellite RNA of cucumber mosaic virus (strain Y)";
RL   J. Gen. Virol. 70:2765-2774(1989).
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CC   These data kindly submitted in computer readable form by:
CC   Martine J. Devic
CC   The Sainsbury laboratory
CC   John Innes Institute
CC   Colney lane
CC   Norwich NR4 7 UH
CC   U.K.
CC   The sequence of the R satellite RNA has been described previously
CC   by Jacquemond and Lauquin.  However, the sequence they described
CC   differs at 36 positions from the sequence of these cDNA clones.
CC   For this reason and to avoid confusion, they refer to their variant
CC   as the Ra satellite RNA in .
CC   The cDNA clone was short of the full length by 11 nucleotides at
CC   the 5' end. The missing Ra satellite RNA was sequenced directly
CC   from the RNA.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .338
FT                   /organism="Cucumber mosaic virus satellite RNA"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="Cucumber mosaic virus strain Ra"
FT                   /clone="CMVRaSAT"
FT                   /db_xref="taxon:12436"
FT   misc_feature    1. .338
FT                   /note="Ra satellite RNA"
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SQ   Sequence 338 BP; 74 A; 88 C; 89 G; 87 T; 0 other;

d00541 Length: 338  21-DEC-2007  Type: N  Check: 5658  ..

       1  gttttgtttg ttagagaatt gcgtagaggg gttatatcta cgtgaggatc
      51  ttatcactcg gcggtgtggg ttacctccct gctacggcgg gttgagttga
     101  cgcacctcgg actggggacc gctggcttgc gagctatgtc cgctactctc
     151  agcactacgc gctcatttga gcccccgctc agtttgctag caaaacccgg
     201  cccatggttt gccgttacct ggaatttcga aagaaaaact ctgtaagtgt
     251  atccgttgac gacgcacgca gggagaagct aaaacctata aggtcatgcc
     301  agtctccgtg aatgtctaaa cattcctcca caggaccc