Sequence of DPV Potato yellow mosaic virus
Potato yellow mosaic virus (PYMV) DNA B, complete genome sequence.
ACC No: D00941
Dated: 2002-06-03 | Length: 2547 | CRC: 150724827
!!NA_SEQUENCE 1.0
ID UVB standard; circular DNA; VRL; 2547 BP.
XX
AC D00941;
XX
SV D00941.1
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DT 10-JUN-1992 (Rel. 32, Created)
DT 03-JUN-2002 (Rel. 72, Last updated, Version 6)
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DE Potato yellow mosaic virus (PYMV) DNA B, complete genome sequence.
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KW BL1; BR1; DNA B.
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OS potato yellow mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2547
RX MEDLINE; 91311403.
RA Coutts R.H., Coffin R.S., Roberts E.J., Hamilton W.D.;
RT "The nucleotide sequence of the infectious cloned DNA components of potato
RT yellow mosaic virus";
RL J. Gen. Virol. 72:1515-1520(1991).
XX
RN [2]
RX MEDLINE; 94235986.
RA Fontes E., Gladfelter H., Schaffer R., Petty I., Hanley-Bowdoin L.;
RT "Geminivirus replication origins have a modular organization.";
RL Plant Cell 6:405-416(1994).
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DR SWISS-PROT; P27267; VBL1_PYMVV.
DR SWISS-PROT; P27268; VBR1_PYMVV.
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CC The genome of PYMV is composed of two single-stranded
CC DNAs A and B. Nucleotide sequences of DNAs A and B revealed the
CC presence of 6 potential coding regions for proteins arranged
CC bi-directionarily in a leftward (L) and rightward (R) orientation
CC (AL1,2,3 and AR1 in A,BL1 and BR1 in B).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2547
FT /db_xref="taxon:10827"
FT /note="5'end of the 268 base sequence common to both DNAs A
FT and B."
FT /sequenced_mol="DNA"
FT /organism="potato yellow mosaic virus"
FT /clone="pMBH2"
FT CDS 575. .1345
FT /codon_start=1
FT /db_xref="SWISS-PROT:P27268"
FT /product="BR1"
FT /protein_id="BAA00783.1"
FT /translation="MYPNRHRRASFCSQPRTYPRNSLIRQQSLFKRNVSKRRPFQTVKM
FT VDDSMMKAQRIHENQYGPDFSLAHNTAVSTFISYPDIAKSLPNRTRSYIKLKRLRFKGI
FT VKVERVHVEVNMDCSVPKTEGVFSLVIVVDRKPHLGPSGGLPTFDELFGARIHSHGNLA
FT IVPSLKDRFYIRHVLKRVISVEKDTMMVDIEGVVALSSRRFNCWAGFKDLDIESRKGVY
FT DNINKNALLVYYCWMSDTVSKASTFVSFDLDYIG"
FT CDS complement(1367. .2248)
FT /codon_start=1
FT /db_xref="SWISS-PROT:P27267"
FT /product="BL1"
FT /protein_id="BAA00784.1"
FT /translation="MNSQLVNPPHAFNYIESQRDEYQLSHDLTEIILQFPSTAAQLTAR
FT LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPLRCNIDLHYF
FT SASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS
FT KQFTDKDVDFSHVDYGRWERKPIRCASMSRVGLRGPIEIRPGESWASRSTIGVGQSEGE
FT SEIENELHTYRDLQRLGASVLDPGESASIVGANMAQSNITMSVAQLNELVRTTVQECIK
FT SNCNSSQPKNFK"
XX
SQ Sequence 2547 BP; 681 A; 509 C; 558 G; 799 T; 0 other;
D00941 Length: 2547 June 18, 2002 10:22 Type: N Check: 4044 ..
1 tttcggggca ttttgataaa tattagtgtt cccccgatat gttcccccaa
51 ttgctctggc cctcaaaact cttatgaatt gggggaactg ggggaactta
101 tatagtagaa gttcctaaag gcagatcaac acgtgcggcc atccgttata
151 atattaccgg atggccgcga gattttttat actgggcttt ctactaaggc
201 ccaagtatga ttggactcta ggcccatttt ttagcggtcc ctctttttcc
251 tcgtcctttc tctgctgttt ccttttactt taatttaaat cactcttaaa
301 ttaaatatgt tgtgatcaat ttcaacagct gtcccgcata atatatgtac
351 tgacgacgtg ggtaattctc gaccaagtta cagtgttaag tcgaaattga
401 ttttaacgtc tctccattta tgagctcatg gtcctattaa gcattacatt
451 acacgtgtac catttaaatt gatcgtgtgg agtcaattta attaattgta
501 taacctgata tgtctatata ttcgctgact aggaatgagc tcattattac
551 gtggtacaaa gacattacat gataatgtat cctaataggc acaggcgtgc
601 ttctttttgt agccagccac gtacttaccc acgtaatagt ttgattagac
651 agcagtcatt attcaagcgt aatgttagca aacgacgacc atttcaaacc
701 gtgaagatgg ttgatgactc catgatgaag gcacaacgta ttcatgagaa
751 tcaatacggt ccagattttt cactggccca taatacagcc gtctctacat
801 ttataagtta ccctgatatt gctaagtctc tgcccaatag aaccaggtca
851 tatattaagc taaaacgact tcggttcaag ggtattgtga aggtggaacg
901 tgtacatgta gaggttaaca tggactgttc tgtgcctaag accgaaggag
951 ttttctcttt ggttattgta gtggatcgta aacctcacct tggaccctct
1001 gggggactgc ctacatttga cgagctattt ggcgctagga tccacagtca
1051 tggtaacttg gcaatagttc catctctgaa ggatcggttc tacatacgcc
1101 atgtactgaa gcgtgtgata tcagtcgaga aggacaccat gatggtggac
1151 atagaaggtg ttgtagccct ttctagcaga cgttttaatt gttgggctgg
1201 ttttaaggac cttgacatag agtcccgaaa gggtgtttat gataacatta
1251 ataagaacgc cctgttagtt tattattgtt ggatgtcgga tacagtatcc
1301 aaagcatcca catttgtatc gtttgatctt gattatattg gatgattgta
1351 ttcactaata caaattttat ttaaaatttt ttggctgaga actattacaa
1401 ttactcttta tacattcttg gacagttgtc cttacaagtt catttaactg
1451 ggctacggac atggttatgt tcgattgggc catgttagca ccaactatag
1501 atgctgactc tcctggatct aggacgctgg ctcctagtct ttgcaaatct
1551 cgatacgtat gtagctcgtt ctctatctct gactcgccct ctgattgacc
1601 cactcctatt gtactcctgg aagcccatga ttcaccaggc cttatttcaa
1651 ttgggcctct gagcccaact ctggacattg atgcgcatct aatgggcttc
1701 ctctcccatc tcccgtagtc gacgtgcgag aaatccacgt ccttatctgt
1751 gaactgtttg gacaggatct tgaccgttgg tgctctgaac ggaatgtcta
1801 cggaatgttt cgccgtcgac agtttcagct tccctttgaa cttggcaaag
1851 tgtgtccgtt gatgaacgtt cgtgtcggaa actctgtaat agagtttcca
1901 tgggatagga tcttttaggg agaaaaagga agctgagaaa tagtggagat
1951 ctatgttgca tcttaacggg aacgtccatg acgcctgcag agattcgttg
2001 tctgtcatcc tcttatcatg aatctccact attacagacc cggtggcgtt
2051 gatgggtacc tgttgcctgt actcaattac gcagtggtct atcttcatac
2101 agctgcgact gagcctcgcc gttaactgcg ccgccgtcga cggaaattgc
2151 agtattatct cagttaggtc atgcgaaagc tgatattcat cccgttgaga
2201 ctctatgtaa ttgaaagcat gaggaggatt aactaactga gaattcattt
2251 attgaaaatt aggccgcgca gcggcaccgc ttccagaata tgaacaggaa
2301 aagaggatga tagggtttct cgaacaggca agacgatgat cttgaagaga
2351 agacagagaa atataatagt gctatggaag actctgaata tgttaatgtt
2401 caaggattag gtagtttata taaagaagtt gttactgctg aggtaccaat
2451 taagaaattt gaagttggga aagtgcatct tctttgctaa gatagtattg
2501 aggattcgta aggaaataat ttttggctta aatagagaac gagcctt