Sequence of DPV Potato mop-top virus
Potato mop-top virus segment RNA 3 genomic RNA, complete sequence, encoding coat protein and 67K readthrough protein.
ACC No: D16193
Dated: 2006-12-11 | Length: 2315 | CRC: 1981487783
ID D16193; SV 1; linear; genomic RNA; STD; VRL; 2315 BP.
XX
AC D16193;
XX
DT 16-AUG-1995 (Rel. 44, Created)
DT 11-DEC-2006 (Rel. 90, Last updated, Version 7)
XX
DE Potato mop-top virus segment RNA 3 genomic RNA, complete sequence, encoding
DE coat protein and 67K readthrough protein.
XX
KW .
XX
OS Potato mop-top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
XX
RN [1]
RP 1-2315
RA Kashiwazaki S.;
RT ;
RL Submitted (06-MAY-1993) to the EMBL/GenBank/DDBJ databases.
RL Satoshi Kashiwazaki, National Agriculture Research Center, Department of
RL Plant Protection; 3-1-1 Kannondai, Tsukuba, Ibaraki 305-8666, Japan
RL (E-mail:skashiwa@narc.affrc.go.jp, Tel:81-298-38-8932, Fax:81-298-38-8929)
XX
RN [2]
RP 1-2315
RA Kashiwazaki S., Scott K.P., Reavy B., Harrison B.D.;
RT "Sequence analysis and gene content of Potato mop-top virus RNA 3: Further
RT evidence of heterogeneity in the genome organization of furoviruses";
RL Virology 206:701-706(1995).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2315
FT /organism="Potato mop-top virus"
FT /segment="RNA3"
FT /isolate="T"
FT /mol_type="genomic RNA"
FT /note="clones pPMTV19 and pPMTV21"
FT /db_xref="taxon:37128"
FT 5'UTR 1. .288
FT CDS 289. .2100
FT /codon_start=1
FT /transl_except=(pos:817. .819,aa:OTHER)
FT /product="67K protein"
FT /note="readthrough protein"
FT /note="readthrough stop codon"
FT /db_xref="GOA:Q85284"
FT /db_xref="InterPro:IPR001337"
FT /db_xref="UniProtKB/TrEMBL:Q85284"
FT /protein_id="BAA03734.1"
FT /translation="MAEIRGERKAAVENRYDSWDHEQAMKAAVRKFISYDQFSAQLRNW
FT REARLNIIEHATSVLSQVSNLGRTHFYSGTERFGGSSLVGDKLYVCLNETRMKTALNNI
FT IVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQD
FT KYELVNGLRWAGAXQLTAQAFWFDVNAAIDEIDNRLLAAAALRLLPGQANHVDGLVSIN
FT YAQLDRALSVVGGNILPQTLEITRDERKRQLHEVRVIDGERVTIRNKDEATVVRNHGQG
FT LPWLLAFLLLLLSVVVVYSTIYLNDWLYRLSVVRHGKPGGGAALKLSGMSDWLCSRLRA
FT RGASNVSRMRKKQACDPSPTGLRKFLTCYNFSFELWGPTGSYDDAQRRIIAEQNSFVEA
FT VRAIDEGDRELAEARLTKVRRILRRHLNYRPDYFDIIEAKAVYLVTVLTNAMSGPVVGV
FT DDDKRRAVVAAFNPSDCGLPNLDDVVADVDSSDIAEFLNDPARMTEAALELRLTRILSA
FT EGSPVDVIEPGGQELISMQVHGESLTVINAGTDSPTVIRSASLSTRHRSSGIEIGSFAV
FT DKVLPYEVEGENNDHIRSLSIYREDVR"
FT CDS 289. .819
FT /codon_start=1
FT /product="coat protein"
FT /db_xref="GOA:Q85283"
FT /db_xref="InterPro:IPR001337"
FT /db_xref="UniProtKB/TrEMBL:Q85283"
FT /experiment="experimental evidence, no additional details
FT recorded"
FT /protein_id="BAA03735.1"
FT /translation="MAEIRGERKAAVENRYDSWDHEQAMKAAVRKFISYDQFSAQLRNW
FT REARLNIIEHATSVLSQVSNLGRTHFYSGTERFGGSSLVGDKLYVCLNETRMKTALNNI
FT IVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQD
FT KYELVNGLRWAGA"
FT 3'UTR 2101. .2315
XX
SQ Sequence 2315 BP; 609 A; 430 C; 645 G; 631 T; 0 other;
d16193 Length: 2315 11-DEC-2006 Type: N Check: 5776 ..
1 gtatttttta agtctaaaca gtttgtgact aactagacga aaaacatatc
51 aactttcttg cagagctttt agtgatacga ccaggtgttg gttgctatta
101 agagctgcat taaagtgttt tcttgtgtct tttgcgggtg ggctacaggc
151 gagcagtccg tataaaggca tctgaaagcg acggcgatca caaaggcgcg
201 agtgaaaatt cttttgtgtt agcggtttga aaattttatt ttcttactgt
251 gtttgttgtt ctataattct cggataccac ccttggaaat ggctgaaatc
301 agaggtgagc gaaaagcagc cgtcgagaat agatacgact cttgggacca
351 tgagcaggcc atgaaggctg ccgtgaggaa gtttatttct tacgatcaat
401 tctcagctca gttaagaaac tggcgcgaag ctaggttaaa cataattgaa
451 catgccacta gcgtgttgag ccaggtgtct aatttaggta gaactcattt
501 ctacagtgga accgaacgct ttggtggaag ttcacttgtt ggtgataaat
551 tgtacgtatg tctgaatgaa accagaatga aaaccgcgtt gaataatata
601 attgtagcgt tgcagacagt gaacggcgaa gggcgggcaa gacgattagg
651 tccgagagaa gcttccgcga acaccggcgg ggaggatagc gctctgaatg
701 tggcacatca actcgcagag gtggacgatt tattaactga tgaaagtttt
751 ttaagagaag ctgtttttac tcaggacaaa tatgagctcg tgaacgggtt
801 acgctgggct ggtgcatagc aattaaccgc tcaggctttt tggtttgacg
851 tcaacgccgc tatcgacgaa attgataatc gactgctggc tgcggctgcg
901 ttaagactat tgcctgggca ggcaaatcac gtggatggtt tagtgtctat
951 aaattacgca caattggata gagcattgag tgttgttggt gggaatattt
1001 tacctcagac gttggagata actcgtgacg aaagaaagag gcaattacat
1051 gaggtcagag ttatcgacgg cgagcgagtc actattcgta acaaggatga
1101 ggcgacggtc gttaggaatc atggtcaggg acttccttgg ctattagcgt
1151 ttttactgtt gctgttatct gttgtagtgg tgtattctac aatatacctg
1201 aacgactggt tgtatcggtt aagtgtggta aggcatggga aacctggcgg
1251 tggtgcagct cttaagctgt cgggtatgtc ggactggttg tgcagtcgct
1301 taagggccag aggcgcttca aatgtgagca ggatgaggaa gaaacaagca
1351 tgcgatccgt cgcccactgg gttgcggaag ttccttactt gttacaactt
1401 ttctttcgaa ctttggggtc ctactggtag ttatgacgat gcgcagcgga
1451 gaattatagc ggaacagaat tcatttgtgg aagccgtgag ggccatagat
1501 gaaggtgaca gggaattggc tgaggcgcgt ttgactaaag ttagacggat
1551 cctcaggaga catcttaatt accgacctga ttattttgat attattgaag
1601 cgaaggcggt atatttggtg acagtgctga caaacgcaat gtcggggcca
1651 gttgttggcg ttgacgatga caagcggaga gcggtggtag ccgcgtttaa
1701 tccgtcagac tgtgggttac cgaatttgga tgacgttgta gccgatgtag
1751 actccagcga tattgctgag tttttgaatg atcctgctag gatgaccgaa
1801 gcggctctgg agctccgatt gaccagaata ctgagtgctg aaggttcacc
1851 ggtggatgta attgagccag ggggccagga acttatttcc atgcaagtgc
1901 atggagaaag tctaactgtc ataaatgccg gcaccgactc tcccacagtg
1951 atcagatccg cgtccttgtc gacgcggcac cgtagttctg gtatagaaat
2001 cggttctttt gcagtggata aagtgctgcc ttacgaggtg gaaggcgaaa
2051 acaacgatca tattaggtcg ctctcgatct atagggaaga tgtcaggtaa
2101 gatggctgtt taaaccgagt gcgtgtgacg ggtctacctc tctaaaagtc
2151 acaccgtgga tactacgaca agtatcagtg cttacaggac ttatgtctgt
2201 ggttcactta aatcgaacca ttggagcaat ccaacgttaa tactacgtta
2251 agtattagtg cttacagggc taaaccgtgg ttcactttaa tcgaaccagt
2301 ctcgaaaggg acgag