Sequence of DPV Raspberry leaf mottle virus
Raspberry mottle virus from USA heat shock protein 70-like protein gene, complete cds.
ACC No: DQ016611
Dated: 2007-06-13 | Length: 1797 | CRC: -534795878
ID DQ016611; SV 1; linear; genomic RNA; STD; VRL; 1797 BP. XX AC DQ016611; XX DT 12-OCT-2006 (Rel. 89, Created) DT 13-JUN-2007 (Rel. 92, Last updated, Version 3) XX DE Raspberry mottle virus from USA heat shock protein 70-like protein gene, DE complete cds. XX KW . XX OS Raspberry mottle virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-1797 RX PUBMED; 17448559. RA Tzanetakis I.E., Halgren A., Mosier N., Martin R.R.; RT "Identification and characterization of Raspberry mottle virus, a novel RT member of the Closteroviridae"; RL Virus Res. 127(1):26-33(2007). XX RN [2] RP 1-1797 RA Tzanetakis I.E., Halgren A.B., Mosier N., Martin R.R.; RT ; RL Submitted (25-APR-2005) to the EMBL/GenBank/DDBJ databases. RL Botany & Plant Pathology, Oregon State University and USDA-ARS, 3420 RL Orchard Ave., Corvallis, OR 97330, USA XX FH Key Location/Qualifiers FH FT source 1. .1797 FT /organism="Raspberry mottle virus" FT /isolate="HCRL-WA" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:326941" FT CDS 1. .1797 FT /codon_start=1 FT /product="heat shock protein 70-like protein" FT /note="HSP70h" FT /db_xref="GOA:Q00P88" FT /db_xref="UniProtKB/TrEMBL:Q00P88" FT /protein_id="AAY82288.1" FT /translation="MVVFGLDFGTTFSTVSVLVGRDACLLLQCGSAYIPTTLFFPESTT FT NVYYGYDADFMYRSKAKGAYFRDLKRWVGCNSANIKDFCSKLHPTYELDLRIVGDSEMH FT TVALTPYNGGKMWYPLPDLIGLYVKCILSDAERAFQSQCTGVICSVPAGYNSIQRAFTE FT QSVSRGGYPCVYMLNEPSAAALSSLPRLKAEDHRLLVYDFGGGTFDVSAVTVNGTTFVV FT KGSGGDMNLGGRDIDRALSDHLKSLVPNPVDWEIDVTSLKEALCSQPDSIMYNVPTQGY FT NETKVELRSSDLLKISQPFVARTMKILQEVMVKAKFVNEPCKVVVVGGSSKLPGLEGSL FT LSINGISAVVPLPDHRAAVSLGCALYSNCLSDSHSLLMVDCATKSISIPRYDGASIVVI FT PAGSPIPFDGERTIGMMNCTKSAHYNARLFEGDYNLCSYNDLIYSAEVSISSLGVQSTT FT PISVNLVLTTKIDSVGKISFSIKGPSGVSVPVQGKSHYDFSTLSPLKSVVAHLSSTDKD FT LASLVLALTQEAEARRELPQHLEKLHSAIVTPSLSLDDHGRAGTFPTLTNGRVAKSRAC FT MGKVIPKLLRGTNVLVLPLGDR" XX SQ Sequence 1797 BP; 402 A; 423 C; 429 G; 543 T; 0 other; dq016611 Length: 1797 13-JUN-2007 Type: N Check: 6590 .. 1 atggtggttt tcggtctgga ttttgggacc actttctcca ctgtttctgt 51 cttagtgggg cgcgatgcgt gtttgcttct ccagtgtggt tccgcttaca 101 tccctacgac tctattcttt ccagaatcga ctacgaacgt gtactacggt 151 tacgatgcgg atttcatgta ccgctctaaa gcgaaaggag cttatttcag 201 ggatctcaag cgatgggtgg gttgcaattc cgctaacatt aaagactttt 251 gttctaagtt acatcctacg tacgagcttg atcttcggat tgtgggtgat 301 tccgagatgc acacggtggc gcttactccg tacaacgggg gaaagatgtg 351 gtaccctttg ccggatttaa tcggcttgta cgttaaatgt attctctctg 401 atgcggaaag agctttccaa tctcagtgca ccggtgtcat ttgttctgtc 451 cccgccggtt ataactcgat tcagagagct ttcacggaac agagtgtctc 501 acgaggaggg tacccctgcg tgtatatgct caatgaacct tctgcggccg 551 ctctcagttc gcttccccgt ttgaaagctg aagatcacag attgttggtt 601 tatgattttg gtggtggtac ttttgacgtg tcggccgtaa ctgttaacgg 651 caccactttt gttgttaaag gatcgggtgg ggatatgaac ttgggtggta 701 gggatatcga tcgagcactc tcagatcatt tgaaatcgtt agttcccaat 751 ccggtagatt gggagatcga cgtaacttct ctaaaagagg cgctatgctc 801 acagcctgat tcaattatgt ataacgtacc cactcaaggc tataatgaga 851 ctaaagtcga gttacgatct tccgatctac ttaagatttc ccaacctttc 901 gtcgccagga ccatgaaaat attacaagag gtcatggtaa aagcgaagtt 951 tgttaacgag ccctgtaaag tggtggttgt aggtggttcc tccaaacttc 1001 cggggttgga aggttcgctg ctgtctatca acggtatttc cgctgtagtc 1051 cctctacctg accacagagc ggctgtttct ctcgggtgtg cgttatactc 1101 caattgcttg tctgattccc actctcttct catggtcgac tgtgctacta 1151 agagcatatc tattcctagg tacgacgggg cttccatagt cgtcatacct 1201 gccggatctc ccataccttt cgatggtgag agaactatcg ggatgatgaa 1251 ttgcacgaag tcagctcatt ataacgctag gctgtttgaa ggtgattaca 1301 acttatgctc ctacaatgat cttatatact ccgctgaggt ctcgatctcg 1351 tcgttgggag ttcagtctac gaccccgata tcagttaact tggttttgac 1401 tactaagatt gactctgtcg gtaagatatc tttttccata aaaggtccgt 1451 cgggtgtgtc tgttcccgtt caaggtaagt ctcattacga tttttccaca 1501 ctgtcacctt tgaaatcggt tgtcgctcac ctcagttcta ctgataaaga 1551 cttagcctct ttggtcctcg ctctcaccca agaggcagaa gccagacgtg 1601 aacttcctca acatttggaa aaacttcaca gtgctatcgt gactccttct 1651 ctgtctttgg acgaccacgg ccgagctggt actttcccaa ccttgaccaa 1701 tggcagagtc gcgaaatctc gtgcatgcat ggggaaggtt attccgaaac 1751 ttctacgggg aacgaacgtg ctcgtcttac ctctcggaga ccgttaa