Sequence of DPV Raspberry leaf mottle virus

Raspberry mottle virus from USA heat shock protein 70-like protein gene, complete cds.

ACC No: DQ016611

Dated: 2007-06-13 | Length: 1797 | CRC: -534795878

                
ID   DQ016611; SV 1; linear; genomic RNA; STD; VRL; 1797 BP.
XX
AC   DQ016611;
XX
DT   12-OCT-2006 (Rel. 89, Created)
DT   13-JUN-2007 (Rel. 92, Last updated, Version 3)
XX
DE   Raspberry mottle virus from USA heat shock protein 70-like protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Raspberry mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-1797
RX   PUBMED; 17448559.
RA   Tzanetakis I.E., Halgren A., Mosier N., Martin R.R.;
RT   "Identification and characterization of Raspberry mottle virus, a novel
RT   member of the Closteroviridae";
RL   Virus Res. 127(1):26-33(2007).
XX
RN   [2]
RP   1-1797
RA   Tzanetakis I.E., Halgren A.B., Mosier N., Martin R.R.;
RT   ;
RL   Submitted (25-APR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Botany & Plant Pathology, Oregon State University and USDA-ARS, 3420
RL   Orchard Ave., Corvallis, OR 97330, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1797
FT                   /organism="Raspberry mottle virus"
FT                   /isolate="HCRL-WA"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:326941"
FT   CDS             1. .1797
FT                   /codon_start=1
FT                   /product="heat shock protein 70-like protein"
FT                   /note="HSP70h"
FT                   /db_xref="GOA:Q00P88"
FT                   /db_xref="UniProtKB/TrEMBL:Q00P88"
FT                   /protein_id="AAY82288.1"
FT                   /translation="MVVFGLDFGTTFSTVSVLVGRDACLLLQCGSAYIPTTLFFPESTT
FT                   NVYYGYDADFMYRSKAKGAYFRDLKRWVGCNSANIKDFCSKLHPTYELDLRIVGDSEMH
FT                   TVALTPYNGGKMWYPLPDLIGLYVKCILSDAERAFQSQCTGVICSVPAGYNSIQRAFTE
FT                   QSVSRGGYPCVYMLNEPSAAALSSLPRLKAEDHRLLVYDFGGGTFDVSAVTVNGTTFVV
FT                   KGSGGDMNLGGRDIDRALSDHLKSLVPNPVDWEIDVTSLKEALCSQPDSIMYNVPTQGY
FT                   NETKVELRSSDLLKISQPFVARTMKILQEVMVKAKFVNEPCKVVVVGGSSKLPGLEGSL
FT                   LSINGISAVVPLPDHRAAVSLGCALYSNCLSDSHSLLMVDCATKSISIPRYDGASIVVI
FT                   PAGSPIPFDGERTIGMMNCTKSAHYNARLFEGDYNLCSYNDLIYSAEVSISSLGVQSTT
FT                   PISVNLVLTTKIDSVGKISFSIKGPSGVSVPVQGKSHYDFSTLSPLKSVVAHLSSTDKD
FT                   LASLVLALTQEAEARRELPQHLEKLHSAIVTPSLSLDDHGRAGTFPTLTNGRVAKSRAC
FT                   MGKVIPKLLRGTNVLVLPLGDR"
XX
SQ   Sequence 1797 BP; 402 A; 423 C; 429 G; 543 T; 0 other;

dq016611 Length: 1797  13-JUN-2007  Type: N  Check: 6590  ..

       1  atggtggttt tcggtctgga ttttgggacc actttctcca ctgtttctgt
      51  cttagtgggg cgcgatgcgt gtttgcttct ccagtgtggt tccgcttaca
     101  tccctacgac tctattcttt ccagaatcga ctacgaacgt gtactacggt
     151  tacgatgcgg atttcatgta ccgctctaaa gcgaaaggag cttatttcag
     201  ggatctcaag cgatgggtgg gttgcaattc cgctaacatt aaagactttt
     251  gttctaagtt acatcctacg tacgagcttg atcttcggat tgtgggtgat
     301  tccgagatgc acacggtggc gcttactccg tacaacgggg gaaagatgtg
     351  gtaccctttg ccggatttaa tcggcttgta cgttaaatgt attctctctg
     401  atgcggaaag agctttccaa tctcagtgca ccggtgtcat ttgttctgtc
     451  cccgccggtt ataactcgat tcagagagct ttcacggaac agagtgtctc
     501  acgaggaggg tacccctgcg tgtatatgct caatgaacct tctgcggccg
     551  ctctcagttc gcttccccgt ttgaaagctg aagatcacag attgttggtt
     601  tatgattttg gtggtggtac ttttgacgtg tcggccgtaa ctgttaacgg
     651  caccactttt gttgttaaag gatcgggtgg ggatatgaac ttgggtggta
     701  gggatatcga tcgagcactc tcagatcatt tgaaatcgtt agttcccaat
     751  ccggtagatt gggagatcga cgtaacttct ctaaaagagg cgctatgctc
     801  acagcctgat tcaattatgt ataacgtacc cactcaaggc tataatgaga
     851  ctaaagtcga gttacgatct tccgatctac ttaagatttc ccaacctttc
     901  gtcgccagga ccatgaaaat attacaagag gtcatggtaa aagcgaagtt
     951  tgttaacgag ccctgtaaag tggtggttgt aggtggttcc tccaaacttc
    1001  cggggttgga aggttcgctg ctgtctatca acggtatttc cgctgtagtc
    1051  cctctacctg accacagagc ggctgtttct ctcgggtgtg cgttatactc
    1101  caattgcttg tctgattccc actctcttct catggtcgac tgtgctacta
    1151  agagcatatc tattcctagg tacgacgggg cttccatagt cgtcatacct
    1201  gccggatctc ccataccttt cgatggtgag agaactatcg ggatgatgaa
    1251  ttgcacgaag tcagctcatt ataacgctag gctgtttgaa ggtgattaca
    1301  acttatgctc ctacaatgat cttatatact ccgctgaggt ctcgatctcg
    1351  tcgttgggag ttcagtctac gaccccgata tcagttaact tggttttgac
    1401  tactaagatt gactctgtcg gtaagatatc tttttccata aaaggtccgt
    1451  cgggtgtgtc tgttcccgtt caaggtaagt ctcattacga tttttccaca
    1501  ctgtcacctt tgaaatcggt tgtcgctcac ctcagttcta ctgataaaga
    1551  cttagcctct ttggtcctcg ctctcaccca agaggcagaa gccagacgtg
    1601  aacttcctca acatttggaa aaacttcaca gtgctatcgt gactccttct
    1651  ctgtctttgg acgaccacgg ccgagctggt actttcccaa ccttgaccaa
    1701  tggcagagtc gcgaaatctc gtgcatgcat ggggaaggtt attccgaaac
    1751  ttctacgggg aacgaacgtg ctcgtcttac ctctcggaga ccgttaa