Sequence of DPV Raspberry leaf mottle virus
Raspberry mottle virus from USA major coat protein gene, complete cds.
ACC No: DQ016612
Dated: 2007-06-13 | Length: 597 | CRC: -1779650704
ID DQ016612; SV 1; linear; genomic RNA; STD; VRL; 597 BP. XX AC DQ016612; XX DT 12-OCT-2006 (Rel. 89, Created) DT 13-JUN-2007 (Rel. 92, Last updated, Version 3) XX DE Raspberry mottle virus from USA major coat protein gene, complete cds. XX KW . XX OS Raspberry mottle virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-597 RX PUBMED; 17448559. RA Tzanetakis I.E., Halgren A., Mosier N., Martin R.R.; RT "Identification and characterization of Raspberry mottle virus, a novel RT member of the Closteroviridae"; RL Virus Res. 127(1):26-33(2007). XX RN [2] RP 1-597 RA Tzanetakis I.E., Halgren A.B., Mosier N., Martin R.R.; RT ; RL Submitted (25-APR-2005) to the EMBL/GenBank/DDBJ databases. RL Botany & Plant Pathology, Oregon State University and USDA-ARS, 3420 RL Orchard Ave., Corvallis, OR 97330, USA XX FH Key Location/Qualifiers FH FT source 1. .597 FT /organism="Raspberry mottle virus" FT /isolate="HCRL-WA" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:326941" FT CDS 1. .597 FT /codon_start=1 FT /product="major coat protein" FT /note="CP" FT /db_xref="GOA:Q00P87" FT /db_xref="UniProtKB/TrEMBL:Q00P87" FT /protein_id="AAY82289.1" FT /translation="MAEFTIADLKEINVADNTTLSEEVEAKITKPLLAKIETANPGFDD FT KGAKLLVGMILYRLALRTTSPNATFNAHDVTTYKVDGKSVKFDDEMVFGYIANHEATPP FT GIKNPLRAWGRTLDQKYLKFIRPLKTTLDFNQRCNKIGLPVGYEYPCADFLTGAGLDNQ FT EAAILNLGRAEALKKEAGDTGHSITSIKQLGRFST" XX SQ Sequence 597 BP; 170 A; 143 C; 142 G; 142 T; 0 other; dq016612 Length: 597 13-JUN-2007 Type: N Check: 6527 .. 1 atggcggaat tcacgatcgc agacttgaaa gaaattaatg tagcagataa 51 caccaccctt tcggaggagg tggaggcaaa gattaccaaa ccgctcctcg 101 ctaaaatcga gactgccaat cccggttttg atgacaaagg cgccaaattg 151 ttagtaggga tgatacttta caggttggct ttgcgtacta cttcacccaa 201 cgccactttt aacgcacacg acgtcaccac ctacaaagta gatggtaaga 251 gtgtgaaatt cgatgatgaa atggtattcg gttacattgc taatcacgag 301 gctaccccac ccggtatcaa gaaccctctc agggcttggg gccgcacgct 351 agatcaaaaa tatctaaaat tcattcggcc attgaagacc actttggact 401 tcaatcagcg ttgcaataag atagggcttc ctgtaggtta tgagtacccg 451 tgtgccgatt ttcttaccgg ggctggtttg gacaaccaag aggctgccat 501 actgaaccta ggtagagcag aggctctcaa gaaggaggct ggcgacaccg 551 gtcattcgat cacctcgata aagcagttag gtcgcttttc cacctaa