Sequence of DPV Potato mop-top virus
Potato mop-top virus isolate Korneta-Nemilkov coat protein (cp) gene, complete cds.
ACC No: DQ102381
Dated: 2010-11-19 | Length: 3088 | CRC: 701893616
ID DQ102381; SV 1; linear; genomic RNA; STD; VRL; 3088 BP.
XX
AC DQ102381;
XX
DT 28-JUL-2005 (Rel. 84, Created)
DT 19-NOV-2010 (Rel. 106, Last updated, Version 2)
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DE Potato mop-top virus isolate Korneta-Nemilkov coat protein (cp) gene,
DE complete cds.
XX
KW .
XX
OS Potato mop-top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Virgaviridae;
OC Pomovirus.
XX
RN [1]
RP 1-3088
RX PUBMED; 17571797.
RA Cerovska N., Pecenkova T., Filigarova M., Dedic P.;
RT "Sequence analysis of the Czech potato mop-top virus (PMTV) isolate
RT Korneta-Nemilkov";
RL Folia Microbiol. (Praha) 52(1):61-64(2007).
XX
RN [2]
RP 1-3088
RA Cerovska N., Pecenkova T.;
RT "Nucleotide sequence of RNA 2 from Czech isolate Korneta-Nemilkov of PMTV";
RL Unpublished.
XX
RN [3]
RP 1-3088
RA Cerovska N., Pecenkova T.;
RT ;
RL Submitted (23-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Virology, Institute of Experimental Botany, Czech Academy of Sciences, Na
RL Karlovce 1a, Prague 6 16000, Czech Republic
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DR RFAM; RF00233; Tymo_tRNA-like.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3088
FT /organism="Potato mop-top virus"
FT /segment="RNA 2"
FT /lab_host="Nicotiana benthamiana"
FT /isolate="Korneta-Nemilkov"
FT /mol_type="genomic RNA"
FT /country="Czech Republic"
FT /db_xref="taxon:37128"
FT gene 268. .798
FT /gene="cp"
FT CDS 268. .798
FT /codon_start=1
FT /gene="cp"
FT /product="coat protein"
FT /db_xref="GOA:Q9IW99"
FT /db_xref="InterPro:IPR001337"
FT /db_xref="UniProtKB/TrEMBL:Q9IW99"
FT /protein_id="AAZ17509.1"
FT /translation="MAENRGERRAAVENRYDAWDHEQAMKAAVRKFISYDQFSAQLRNW
FT REARLNIIEHATSVLSQVSNLGRTHFYSRTERFGGSSLVGDKLYVCLNETRMKTALNNI
FT IVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLREAVFTQD
FT KYELVNGLRWAGA"
XX
SQ Sequence 3088 BP; 822 A; 565 C; 865 G; 836 T; 0 other;
dq102381 Length: 3088 19-NOV-2010 Type: N Check: 4011 ..
1 tatcaacttt cttgcagagc ttttagtaat acgaccaggt gttggttgct
51 attaagagct gcattaaagt gttttcttgt gtcttttgcg ggtgggctac
101 aggtgagcag tccgtataaa ggtatctgaa agcgacggcg atcacaaagg
151 cgcgagtgga aattcttttg tgttagcggt ttgaaaattt tattttctta
201 ctgagtttgt tgttctataa ttctcggaga tctggaatca gaggaggttt
251 gtttaccacc cttggaaatg gctgaaaaca gaggtgagcg aagagcagcc
301 gtcgagaata gatatgacgc ttgggaccat gagcaggcca tgaaggctgc
351 cgtgaggaag tttatttctt acgatcaatt ctcagctcag ttaagaaact
401 ggcgcgaagc taggttaaac ataattgaac atgccactag cgtgttgagc
451 caggtgtcta atttaggtag aactcatttc tacagtagaa ccgaacgctt
501 tggtggaagt tcacttgttg gtgataaatt gtacgtatgt ctgaatgaaa
551 ccagaatgaa aaccgcgttg aataatataa ttgtagcgtt gcagacagtg
601 aacggcgaag ggcgggcaag acgattaggt ccgagagaag cttccgcgaa
651 caccggcggg gaggatagcg ctctgaatgt ggcacatcaa ctcgcagagg
701 tggacgattt attaactgat gaaagttttt tgagagaagc tgtttttact
751 caggacaaat atgagctcgt gaacgggtta cgctgggctg gtgcatagca
801 attaaccgct caggcttttt ggtttgacgt caacgccgct atcgacgaaa
851 ttgataatcg actgctagcg gcggctgcgt taagactatt gcctgggcag
901 gcaaatcacg tggatggtct agtgtctata aattacgcac aattggatag
951 agcattgagt gttgttggtg ggaatatttt acctcagacg ttggagataa
1001 ctcgtgacga aagaaaaagg caattacctg aggtcagagt tatcgacggc
1051 gagcgtgtca ctattcgtaa caaagatgag gcaacggtca ttagaaatca
1101 tggtcaggga cttccttggc tattagcgtt tttactgttg ttgttatctg
1151 ttgtggtggt gtattctaca atatacctga acgactggtt gtatcggtta
1201 agtgtggtaa ggcatgggaa acctggcggt ggtgcagctc gtaagctgtc
1251 gggtatgtcg gactggttgt gcagtcgctt aagggccaga ggcgctttga
1301 atgtgaatag gatgaggaag aaacaagcat gcgatccgtc gcccactggg
1351 ttgcggaagt tccttacttg ttataacttt tcttatgaac tttgggatcc
1401 tactggtagt tatgacgatg cgcagcggag aattatagcg gaacagaact
1451 cgtttgtgga agccgtgagg gccatagatg agggtgacag ggagttggct
1501 gaggcgtgtt tgactaatgt tagacggatc ctcaggaggc atcttaatta
1551 ccgacctgat tattttgata ttattgaagc gaaggcggta tatttggtga
1601 cagtgctgac aaacgcaatg tcggggccag ttgttggcgt tgacgatgac
1651 gagcggagag cggtggtagc cgcgtttaat ccgtcagact gtgggttacc
1701 gaatttggat agttgctctt tggacgaaat caagaatttt gatttgtccg
1751 aagtggtgat cggtgagggt accaatgttg aacaagcaag agggtatctt
1801 aatctttgta gaaatattca gtgtatgatt gagacaattg gcaccgttca
1851 atttcttggt gtgttgtcgt cgtatacagg tcctcagtat ccttgtatat
1901 cccaagcttt tgctgaggat aagaggataa gaaaagaaag gctgaaagat
1951 aaggacaata taacgacagc ggatattatt gcctatttgg tgagtggggt
2001 aatggcagcc tacgctcttg tggcagtaag taaaggaggg atcacactgt
2051 ttaagtttat gaagaactat gcgggtggag gtggtgacgg gcctggttca
2101 agcagaagaa taagacaatt agaggccgct ttaccctccc ttccgcagcc
2151 agaagaactg accatgatgg aacgtttgag aagacttcaa tcttccgata
2201 acgatttagc tttgagaagg aacccgtccg atatgcttag tcaggtcgta
2251 cgtgacgttg tagccgatgt agactccagc gatatcgctg agtttttgaa
2301 tgatcctgct aggatgaccg aagcggctct ggagatccga ttgaccagaa
2351 taatgagtgc tgaaggttca ccggtggatg taattgagcc agggggccag
2401 gaacttattt ccatgcaagt gcatggagaa agtctaaccg tcataaatgc
2451 cggcaccgac tctcccacag tgatcagatc cgcgtccttg tcgacgcggc
2501 accgtagttc tggtatagaa atcggttctt ttgcagtgga taaagtgctg
2551 ccttacgagg tggaaggcga aaacgacgat catggtgacg ccggtaagaa
2601 gcccactgtc gcccaagctt tgatgattgg gggtggtgcg gttaagggac
2651 agggtaattt gggtgttact aatggcaaag aactcttgaa ggtattaggt
2701 agctctcgat ctatagggaa gatgtcaggt aagatggctg tttaaaccga
2751 gtgcgtgtga cgggtttacc tctctaaaag tcacaccgtg gatactacga
2801 caagtatcag tgcttacagg acttatgtct gtggttcact taaatcgaac
2851 cattggagca atccaacgtt aatactacgt taagtattag tgcttacagg
2901 gctaaaccgt ggatcacttt aatcgaacca gtctcgaaag ggacaaaact
2951 gactttctag ctgtttttga gataattcca aaaaactcat tatccggctt
3001 agggaagagc ggccagttgc tgctgcgatc aagacacgat cgttcaaaag
3051 ggtgcaactc cccccccctt ggagggtatc caagacca