Sequence of DPV Arabis mosaic virus large satellite RNA
Arabis mosaic virus isolate J86 satellite-encoded protein mRNA, complete cds.
ACC No: DQ187316
Dated: 2006-02-18 | Length: 1139 | CRC: 221726430
ID DQ187316 standard; mRNA; VRL; 1139 BP. XX AC DQ187316; XX SV DQ187316.1 XX DT 18-FEB-2006 (Rel. 86, Created) DT 18-FEB-2006 (Rel. 86, Last updated, Version 1) XX DE Arabis mosaic virus isolate J86 satellite-encoded protein mRNA, complete DE cds. XX KW . XX OS Arabis mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae; OC Nepovirus; Subgroup A. XX RN [1] RP 1-1139 RA Wetzel T., Bassler A., Amren M.A.W., Krczal G.; RT "A RT/PCR-partial restriction enzymatic mapping (PREM) method for the RT molecular characterisation of the large satellite RNAs of Arabis mosaic RT virus isolates"; RL J. Virol. Methods 132(1-2):97-103(2006). XX RN [2] RP 1-1139 RA Wetzel T., Bassler A., Wahab A.M.A.B., Krczal G.; RT ; RL Submitted (30-AUG-2005) to the EMBL/GenBank/DDBJ databases. RL AlPlanta - Institute for Plant Research, RLP Agroscience GmbH, Breitenweg RL 71, Neustadt an der Weinstrasse 67435, Germany XX FH Key Location/Qualifiers FH FT source 1. .1139 FT /db_xref="taxon:12271" FT /mol_type="mRNA" FT /organism="Arabis mosaic virus" FT /isolate="J86" FT /specific_host="grapevine 'Riesling'" FT CDS 15. .1064 FT /codon_start=1 FT /product="satellite-encoded protein" FT /protein_id="ABB03713.1" FT /translation="MALTQRRKQPSLTHSPRVPTELLVPTEYARLFSKKQLERMLALAC FT KHRARQAAQAVSKRTSRDRNGSKIMGQGPSAVAPRVSLGHKQQFDGGASLTPMKSKRAV FT RRARRRAAAKKAKAKTGTLPVQKVGPLRVQAVGFTGRASYLSSLVLGTSHSKTKMEVVS FT SPPQTKRAPIVDKGAFTLTSITPAECRERAGRNFHPITGSFRSANVALNAFCVRSREGC FT GECKACVDRYCSLRFVRSFDQIGTSRVIQVEAVNGDPAGEMDSPSATEPPGFWAPAEMQ FT APSGEGRSLKRCDVVTLARVTPVLRMLRRADPTLVDSKLLWESAFRTVFPQRKCAYPYG FT CFASGSNCG" XX SQ Sequence 1139 BP; 248 A; 286 C; 335 G; 270 T; 0 other; dq187316 Length: 1139 18-FEB-2006 Type: N Check: 6524 .. 1 atgaaaaatt ttctatggct cttacgcaac ggcggaagca gccatctttg 51 actcactcac caagagttcc tacggaactc ttggtaccta ccgagtatgc 101 tagactgttt tccaagaaac agctcgagcg catgctcgca ttggcgtgta 151 agcaccgtgc acgtcaagct gctcaggcag taagtaaacg gacctcccga 201 gaccgaaatg ggagtaaaat aatgggtcag ggtccttctg ctgtggcccc 251 gcgagtgtcg cttggacaca aacagcagtt cgacggaggg gcgagtctaa 301 ccccaatgaa gtcaaagcgt gcggtgcggc gtgcaaggcg ccgtgctgcc 351 gctaaaaagg cgaaagccaa gaccgggacc ttacccgtac aaaaggttgg 401 gccattgcgt gtccaagctg tggggttcac gggccgggcg agttatttgt 451 ctagcctggt tttggggact tcccacagca aaaccaaaat ggaggtggtg 501 agctcacctc cccaaacaaa aagagctccc atcgtcgata agggtgcttt 551 tacccttact tctatcacac cggctgagtg ccgggagagg gctgggcgca 601 atttccaccc cattacgggt tccttccgat ctgcgaatgt ggcccttaat 651 gcgttttgcg tccgctctcg tgagggatgc ggcgagtgca aggcctgtgt 701 ggacaggtat tgctccctgc ggttcgtcag gagctttgat cagattggca 751 cttcgcgtgt catccaggtc gaagctgtga atggcgatcc agccggagag 801 atggatagcc ctagtgctac ggaacctcct gggttctggg ctcctgcaga 851 aatgcaggct ccttcgggag aggggcgatc ccttaaaagg tgcgatgtgg 901 tgacactcgc acgcgtgaca cccgttttac ggatgttacg tagagctgac 951 cccactcttg tggacagcaa acttttatgg gaatccgctt tccggacggt 1001 ttttcctcag cgcaagtgcg cgtatcctta tggttgcttc gcgagtggga 1051 gtaactgtgg gtagggaaaa ctgaaggtgg gacttcgttt gtttatagtc 1101 tggcgtaagc tgggattttg gttgctcatt agtcaactc