Sequence of DPV Operophtera brumata idnoreovirus

Operophtera brumata reovirus segment 5, complete sequence.

ACC No: DQ192239

Dated: 2005-10-29 | Length: 2106 | CRC: -1585210466

                !!NA_SEQUENCE 1.0
ID   DQ192239   standard; genomic RNA; VRL; 2106 BP.
XX
AC   DQ192239;
XX
SV   DQ192239.1
XX
DT   29-OCT-2005 (Rel. 85, Created)
DT   29-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE   Operophtera brumata reovirus segment 5, complete sequence.
XX
KW   .
XX
OS   Operophtera brumata reovirus
OC   Viruses; dsRNA viruses; Reoviridae; unclassified Reoviridae.
XX
RN   [1]
RP   1-2106
RA   Graham R.I., Rao S., Possee R.D., Sait S.M., Mertens P.P.C., Hails R.S.;
RT   "Detection and characterization of three novel species of reovirus
RT   (Reoviridae), isolated from geographically separate populations of the
RT   winter moth Operophtera brumata (Lepidoptera: Geometridae) on Orkney";
RL   Unpublished.
XX
RN   [2]
RP   1-2106
RA   Graham R.I., Rao S., Possee R.D., Sait S.M., Mertens P.P.C., Hails R.S.;
RT   ;
RL   Submitted (04-SEP-2005) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Biology, Institute for Animal Health, Ash Road, Pirbright,
RL   Woking, Surrey GU24 0NF, United Kingdom
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2106
FT                   /db_xref="taxon:352248"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Operophtera brumata reovirus"
FT                   /segment="5"
FT   CDS             31. .1893
FT                   /codon_start=1
FT                   /product="unknown"
FT                   /protein_id="ABB17209.1"
FT                   /translation="MSSTNVILQPTWPIFQQFQSGDTIQISLVRNNRVVNSFVDQQPIH
FT                   PSCIGESLTTTIIVNQVKYLDWLIAQSEAPLIPLLSAKHELQAANSNGFFSRYLAHAIT
FT                   SRSNPYEVTSEQILGMVNDSLIEVKAVTTQVARNTYDVTIGLQSLSKQLTDAIATIQQP
FT                   ATKPDVSGKVCACVATIPSQPLIVNDPVTHLGGIRTAVCNRSGYVTMFELTRDWALVKL
FT                   GCGYEMSEYYFWIYFHRRADDTRVPKLGHSNYTAVSMFLSPMLASHFDNSVSGVATIST
FT                   TLSPNALATSLKHAFLRLPTISLSRSHPVNAVLLKLGGIPMGGGRFQIEVINQLLTSVR
FT                   SFLNSCKVTPWLVLSTYQLQEILDVGHMVGKFPTTLEEQRFYHGKEIEYFSEEVRTMII
FT                   RPCLESQRTRRLEMYQGITHVEDDRYRTPCGYESELSLITLHPCVAPLTTLGIDETFTL
FT                   QNGIATISSGPIGKRSFCRYCFSELPNVTLAKLCALNCKARMSISNKSVKSTANLCRRF
FT                   ANGDEWTCVVDGRHLNLPDTPTPKRRINKITTREIVYTDEDRAMGIENAGPRPTREIGL
FT                   RQHQQVVDDDVNQHPQLDFSRLSWADVVDDDDLGTFDDGSVYTS"
XX
SQ   Sequence 2106 BP; 603 A; 455 C; 443 G; 605 T; 0 other;

DQ192239  Length: 2106  November 1, 2005 08:47  Type: N  Check: 542  ..

       1  aaataaaacc ccttatgtgt attgctcgca atgtcttcta ccaacgtaat
      51  cctccaacca acatggccaa tatttcaaca atttcaaagc ggagacacca
     101  tacaaatatc attagtgcga aataatagag tcgtcaactc atttgttgat
     151  caacaaccca tccatccatc ttgcatcggg gaatctctaa ctacaacgat
     201  tatcgtgaat caggttaagt atctggactg gttaattgct cagagtgaag
     251  caccattgat accattacta tcagcgaaac atgaactaca agctgccaat
     301  tcgaatggct ttttcagtcg ttatctagca cacgcaatta cctcacggag
     351  taatccatat gaagtaactt cagagcaaat tcttggtatg gttaatgata
     401  gtttgattga agttaaggca gttacaactc aagtcgctcg gaatacatac
     451  gatgttacaa tcggattaca aagtttatcg aaacaattga ctgacgctat
     501  tgcaacaata cagcaaccag ctactaaacc agatgtaagt ggaaaggttt
     551  gtgcgtgtgt agccaccata ccaagtcagc cattgatagt gaatgatcct
     601  gtaactcatc ttggtggaat tcgtaccgca gtttgtaacc gaagtggata
     651  tgttacaatg tttgaattga cacgcgactg ggcacttgtc aaacttggat
     701  gtggttacga gatgtctgaa tattactttt ggatttattt tcaccgacgt
     751  gctgatgata cacgagtacc aaaacttggc cactctaact acaccgccgt
     801  tagcatgttc ttgagcccga tgttagcctc ccactttgac aattcagtct
     851  ctggtgttgc aacaatctcg acaacgctgt caccaaatgc actagcaaca
     901  tctttgaaac atgctttcct tcgtctacca acaattagtt tgtcgcgttc
     951  tcatccagtt aatgcggtat tgcttaaact cggtggtatt ccaatgggag
    1001  gtggacgctt tcagatcgag gttattaacc aactactcac ttcggttcgc
    1051  tctttcctaa attcttgtaa ggtaacacca tggcttgtgc tttccacata
    1101  tcagcttcag gagattctag atgtcggaca tatggttggt aagtttccaa
    1151  ctacgctcga agaacaacgg ttttaccacg gcaaggagat tgaatatttt
    1201  tccgaagaag tacgaacgat gataattcgt ccatgtctcg agagtcagcg
    1251  aacccgaagg ctagagatgt accaaggaat aacgcatgtc gaggatgatc
    1301  gatatcgtac tccatgtgga tatgagtctg aactttcgct aataaccctt
    1351  catccatgtg ttgcaccttt aacaactctg ggcattgacg agactttcac
    1401  tctacaaaac ggcatcgcaa caatttcttc tggtccaatt ggtaagagaa
    1451  gcttttgccg gtactgtttc tcagaattac ccaacgttac gcttgcaaaa
    1501  ttatgcgcac tcaattgtaa agctcgaatg tctattagca ataaatcggt
    1551  taaatcaaca gctaatctat gccgtcggtt cgctaatggt gatgagtgga
    1601  cgtgtgttgt tgatggtagg cacctaaatt tacccgacac gccaactccg
    1651  aaacgtcgta tcaacaagat taccacacgt gagattgttt acactgacga
    1701  ggatcgcgcg atgggtattg agaatgctgg accacgccca actcgcgaga
    1751  ttggcttacg gcagcatcaa caggtggttg atgatgatgt taatcagcat
    1801  ccgcagcttg attttagtag attatcatgg gctgacgttg tagacgatga
    1851  tgacttaggt acatttgacg atggaagtgt ttatacatca taacacatcc
    1901  ttcttacaaa acgacaagac tgacatttgg ccaaagatta tgtgatatta
    1951  ctgagtttaa ctgatattaa ccaacccatg ttggaggacg ataagcgttt
    2001  cccaagtatg ttgcctgtaa tgcatgttaa ggtcctgcgt gttattcctc
    2051  atgctggtca tagacctgta tgcggccagg atgcgtacta cggggttggg
    2101  taggtt