Sequence of DPV Wuhan nodavirus
Wuhan nodavirus capsid precursor protein gene, complete cds.
ACC No: DQ233638
Dated: 2006-07-14 | Length: 1562 | CRC: -238190074
ID DQ233638; SV 1; linear; genomic RNA; STD; VRL; 1562 BP.
XX
AC DQ233638;
XX
DT 14-JUL-2006 (Rel. 88, Created)
DT 14-JUL-2006 (Rel. 88, Last updated, Version 1)
XX
DE Wuhan nodavirus capsid precursor protein gene, complete cds.
XX
KW .
XX
OS Wuhan nodavirus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Nodaviridae;
OC Betanodavirus.
XX
RN [1]
RP 1-1562
RX DOI; 10.1016/j.virusres.2006.03.011.
RX PUBMED; 16644053.
RA Liu C., Zhang J., Wang J., Lu J., Chen W., Cai D., Hu Y.;
RT "Sequence analysis of coat protein gene of Wuhan nodavirus isolated from
RT insect";
RL Virus Res. 121(1):17-22(2006).
XX
RN [2]
RP 1-1562
RA Liu C., Zhang J., Hu Y.;
RT ;
RL Submitted (07-OCT-2005) to the EMBL/GenBank/DDBJ databases.
RL Virology, Life Science, Luojiashan, Wuhan, Hubei 430072, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .1562
FT /organism="Wuhan nodavirus"
FT /host="Pieris rapae"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:356127"
FT CDS 108. .1310
FT /codon_start=1
FT /product="capsid precursor protein"
FT /note="structural protein"
FT /db_xref="UniProtKB/TrEMBL:Q0QVT6"
FT /protein_id="ABB71128.1"
FT /translation="MAKKQPRKSVRIAPRMRVSTIPASVNTASRLRSVQTKQLNLYSNT
FT DRLYHVTLPANTAKGTVIYDQIITPAIGRRLRQQAALFQKIKNNSLRFEVQTQTPTTNG
FT GGYVVAFLHDPSMDVGQGENALKALTAVQGTQTSKFWQSVNMNVQTTKQQDFTLNGSDV
FT RLFSPGRFVVLTDGAPTEPVSITILFHWTVELSRPALQRPLNQLAQAVLVATELYQEGL
FT YLRYSNWDGTNFSPPKGQNNETALHMENAFAGLPPISSFGTNTLFYQLPYPLRVTGNEV
FT LAQFIGFSVSGGNLRAAPYQLPGTQYALTSTSTTAQSFQFMVQGVRLTPVMPDEFYGTT
FT QGAFLSENIQSVSHNLLPTICRNFQQMKLTGSSTPSDKKQDLQDRLSSMRDRFWDPQNM
FT P"
XX
SQ Sequence 1562 BP; 459 A; 405 C; 301 G; 397 T; 0 other;
dq233638 Length: 1562 14-JUL-2006 Type: N Check: 8215 ..
1 ataaaacctt acaaattatg tcaaaattaa tcaatatttt agacagcttg
51 ttatccacta ataaatctaa taagatgtca cgtggtatac gtaaatcaaa
101 acgcaagatg gcaaagaagc agcctcgcaa gtcagtgcgt atcgcacccc
151 gcatgcgagt atcaactata cctgcttctg taaatactgc tagccggcta
201 cggtcggtgc agaccaaaca gttaaatctg tatagtaata ctgatcgtct
251 ctatcatgtc acccttcccg ccaatacagc gaagggtaca gttatctacg
301 atcagataat aacacccgcc atcggtagaa gattacgtca acaggctgca
351 ctttttcaga aaataaagaa taattcactc cgcttcgagg tccagaccca
401 aacaccaact acaaatggtg gtggttacgt agttgctttt ctacatgatc
451 catccatgga tgtcgggcag ggtgaaaatg ctcttaaagc tctgacagca
501 gtgcaaggca ctcagacctc aaaattctgg cagtcagtca atatgaacgt
551 ccaaacaaca aaacaacagg actttacctt gaacggaagt gatgttcgtc
601 tattttcacc aggacgtttc gtcgttttga cagacggtgc accaactgag
651 cccgtctcta taaccatatt gttccactgg actgtcgagt tgtcccgccc
701 tgcactacaa cgtccgctca accaattagc ccaagcagtg ctcgtagcca
751 cagagttata tcaagaaggc ctttatctcc gctattccaa ctgggatggt
801 accaacttct cccctccgaa aggtcaaaac aatgaaacag cattgcacat
851 ggaaaacgca tttgctgggc taccgcctat atcttccttt ggcaccaata
901 ccctgtttta tcaattacca tacccattaa gagttacggg aaacgaggta
951 ttagctcaat tcattggatt tagcgttagt ggaggcaatt tacgggcagc
1001 accctaccaa ttacctggta cgcaatatgc tctgacttct acctcaacca
1051 ctgcacaatc cttccagttt atggtgcaag gagtaagatt gacccctgtt
1101 atgcctgatg aattttatgg tacgacacag ggtgcttttt tatccgagaa
1151 tatccagtca gtttctcaca atctgctgcc gaccatctgc agaaactttc
1201 aacaaatgaa actgacaggc tcctcgacac catcagacaa gaagcaggac
1251 ttacaagaca ggctatcatc gatgagggac cgtttctggg acccacagaa
1301 tatgccttag gcgtacaaga agtagtagcc gctgtaggat ctgtagatgc
1351 gactttatta tctctagatg cgactgttgc aacctcagcc acagcaataa
1401 ccgcagccat agctgccggc actacagcca taaccacagc aattgtatcg
1451 gaaaacaaga acaccgcgac attgctacaa tcggtacttg gctacttgcg
1501 ccttttctct gttcctgcct ctaatggcac tactatcctc ttttacccga
1551 ccacatcaac at