Sequence of DPV Squash leaf curl virus
Squash leaf curl virus isolate 10 segment DNA-A, complete sequence.
ACC No: DQ285016
Dated: 2005-11-21 | Length: 2637 | CRC: -528022658
ID DQ285016 standard; circular genomic DNA; VRL; 2637 BP.
XX
AC DQ285016;
XX
SV DQ285016.1
XX
DT 21-NOV-2005 (Rel. 85, Created)
DT 21-NOV-2005 (Rel. 85, Last updated, Version 1)
XX
DE Squash leaf curl virus isolate 10 segment DNA-A, complete sequence.
XX
KW .
XX
OS Squash leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2637
RA Brown J., Idris A., Baumann K.;
RT "Characterization of Squash leaf curl and Squash mild leaf curl viruses:
RT phylogeny and reassortment between begomoviruses in the SLCV clade";
RL Unpublished.
XX
RN [2]
RP 1-2637
RA Brown J., Idris A., Baumann K.;
RT ;
RL Submitted (08-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .2637
FT /country="USA:Imperial Valley, California"
FT /db_xref="taxon:10829"
FT /mol_type="genomic DNA"
FT /organism="Squash leaf curl virus"
FT /isolate="10"
FT /segment="DNA-A"
FT CDS 212. .967
FT /codon_start=1
FT /product="AV1"
FT /protein_id="ABB76209.1"
FT /translation="MVKRDAPWRLMAGTPKVSRSANFSPRGGMGPKFNKAAAWVNRPMY
FT RKPRIYRTMRGPDIPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATI
FT KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSITN"
FT CDS complement(964. .1368)
FT /codon_start=1
FT /product="AC3"
FT /protein_id="ABB76213.1"
FT /translation="MVMDLRTWDDITVHQAENSVFIWEVPNPLYFKMYNVEDPLYTHTR
FT IYHIQIRFNHNLRRALNLHKAFLNFQVWTESIRASGTTYLNRFRHLVMLYLDRLGVIGL
FT NNVIRAVSWATDRSYVNYVLENHEIKFKIY"
FT CDS complement(1109. .1504)
FT /codon_start=1
FT /product="AC2"
FT /protein_id="ABB76212.1"
FT /translation="MPNSSSSKVPSIKAQHRIAKKRAVRRRRIDLDCGCSIYIHINCAK
FT DGNGFTHMGRHHCASGREFRFYLGGSKSPLFQDVQRGGSTLHAHKDIPHTNPVQPQPEE
FT STKSSQSVPELPSLDGIDSSFWDDIFE"
FT CDS complement(1446. .2492)
FT /codon_start=1
FT /product="AC1"
FT /protein_id="ABB76210.1"
FT /translation="MPRNPNSFRLTARNIFLTYPRCDVPKEEVLEMLLHLSWSVVKPNY
FT VRVAREEHSDGSPHLHCLIQLSGKSNIKDAGFFDLTHPRRSARFHPNIQAAKDTNAVKN
FT YITKEGDYCESGQYKVSGGSKSNKDDVYHNAVNACSAGEALDIIKAGDPKTFIVNYHNL
FT LANVERLFQKPPEPWVPPFELSSFTSVPEELQDWADDYFNECSAARPRPTSIIIEGGSR
FT TGKTMWARSLGPHNYLSGHLDFNSRVFSNDVKYNVIDDVAPHYLKLKHWKELIGAQRDW
FT QSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKAENSALREWTEKNAKFIFLEGPL
FT YQSTAQDC"
FT CDS complement(2048. .2425)
FT /codon_start=1
FT /product="AC4"
FT /protein_id="ABB76211.1"
FT /translation="MFPKKKFLRCFCISRGRSSNRITLESPERNIPTGLRTYTASFNYL
FT ENPTSRMLDFSTSLTPDGLPDFTQTFRLPKTPTPSRTTSPKKVIIVNPGNIKCLGVQSQ
FT TKTTYITMPLMHVVREKLSTL"
XX
SQ Sequence 2637 BP; 702 A; 588 C; 598 G; 749 T; 0 other;
DQ285016 Length: 2637 21-NOV-2005 Type: N Check: 9860 ..
1 accggatggc cgcccgtttt tggtgtcctc tactttagcc cacggggcag
51 gcccaggccc aaatcaacca caaccttttt ttattttatg ggaccacttt
101 aattattcca accaaccacg ttgcgcctga cgagtctata taataatgcc
151 ttggtgacta agtgtggtcc ctataaaaaa gctgacatat cccatacctc
201 tttaattcaa aatggttaag agagatgccc catggcgttt aatggcgggg
251 accccaaagg tctcacgctc tgctaacttt tcgcctcgtg gaggtatggg
301 cccaaaattc aacaaggccg ctgcatgggt taacaggccc atgtacagga
351 agcccaggat ctatcgcaca atgagaggcc cagacatccc caagggatgt
401 gaggggccat gcaaggttca gtcttacgag cagcggcatg atatctctca
451 tcttggcaag gtaatgtgta tttctgacgt gacgcgtggt aatggcatta
501 ctcaccgcgt cggcaagcgc ttttgtgtta agtctgtata tattttaggc
551 aagatatgga tggacgaaaa tatcaagttg aagaatcaca cgaacagtgt
601 gatgttttgg ttagttcgag accgtagacc atatggcact cctatggatt
651 tcggccaggt gttcaatatg ttcgacaacg agcccagtac ggcaactatc
701 aagaacgatc tacgtgatcg ttatcaagtc atgcacaggt tctacgcgaa
751 ggtcactggt ggtcagtatg cgagcaacga acaagccttg gttaggcgtt
801 tctggaaggt caacaaccat gttgtgtata accaccagga agccgggaaa
851 tacgagaatc atacggagaa cgctctgtta ttgtatatgg catgtactca
901 tgcctctaac cctgtatatg cgacattgaa aattcggatc tatttttatg
951 attcgataac aaattaataa attttgaatt ttatttcatg attctcgagt
1001 acgtaattta catatgaacg gtctgttgcc caagatacag ctcgtataac
1051 gttattgaga ccaataactc ccaacctatc taagtacaac ataactaaat
1101 gcctaaatct attcaaatat gtcgtcccag aagctcgaat cgattccgtc
1151 cagacttgga agttcaggaa cgctttgtga agatttagtg ctctcctcag
1201 gttgtggttg aaccggattt gtatgtggta tatccttgtg tgcgtgtaaa
1251 gtggatcctc cacgttgtac atcttgaaat agaggggatt tggaacctcc
1301 caaataaaaa cggaattctc tgcctgatgc acagtgatgt cgtcccatgt
1351 gcgtaaatcc attaccatct ttggcgcagt tgatatgaat gtatatggaa
1401 cagccacagt ctaagtcgat tcttcgacga cgaacagctc tctttttagc
1451 aatcctgtgc tgtgctttga tagaggggac cttcgaggaa gatgaatttg
1501 gcattttttt cagtccactc tcttagagcc gagttctcgg ctttgtcgag
1551 gaaatcttta taactggacc cctctccagg attgcacagc acgattgatg
1601 ggattccacc tttaatttga accggctttc catatttaca gttggactgc
1651 cagtcccttt gggccccaat caattccttc cagtgcttta gctttaggta
1701 atgcggagcg acgtcatcaa tgacgttata cttgacgtca tttgagaaaa
1751 ccctagaatt gaaatcaaga tggccgctca agtaattatg tgggcctaac
1801 gacctagccc acattgtctt gcccgttctt gaaccacctt ctatgattat
1851 actagttggc cttggccgcg cagcggaaca ctcattaaaa taatcgtcag
1901 cccaatcttg taactcttct ggaactgacg tgaacgaaga gagctcaaac
1951 ggaggaaccc acggttccgg aggtttctga aataatctct cgacgttagc
2001 taataaattg tgataattaa cgataaacgt ctttggatca ccagctttta
2051 taatgtcgag agcttctccc gcactacatg cattaacggc attgtgatat
2101 acgtcgtctt tgtttgactt tgaaccccca gacactttat attgcccgga
2151 ttcacaataa tcaccttctt tggtgatgta gttcttgacg gcgttggtgt
2201 ctttggcagc ctgaatgttt gggtgaaatc gggcagaccg tctggggtga
2251 gtgaggtcga aaaatccagc atccttgatg ttggattttc cagataattg
2301 aatgaggcag tgtaagtgcg gagacccgtc ggaatgttcc tctctggcga
2351 ctctaacgta attcggtttg acgaccgacc acgagagatg cagaagcatc
2401 tcaagaactt cttctttggg aacatcgcac cttggataag ttaagaatat
2451 gtttctggca gttaaacgaa aggaattagg gtttcgtggc atatttcgta
2501 aatatgcatc gggacaccag gaggtgtcct ctcaactttc tcatattgct
2551 ggtgtcctgg tgtcctatat atacctcaag acacataaag cctctagggg
2601 acaccaaggg gcaaaatcgg ccatccgcaa taatatt