Sequence of DPV Cotton leaf curl Multan betasatellite

Mesta yellow vein mosaic virus-associated DNA beta isolate Basirhat C1 protein (C1) gene, complete cds.

ACC No: DQ298137

Dated: 2012-10-23 | Length: 1354 | CRC: -1088407517

                ID   DQ298137; SV 1; linear; genomic DNA; STD; VRL; 1354 BP.
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AC   DQ298137;
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DT   14-DEC-2005 (Rel. 86, Created)
DT   23-OCT-2012 (Rel. 114, Last updated, Version 3)
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DE   Mesta yellow vein mosaic virus-associated DNA beta isolate Basirhat C1
DE   protein (C1) gene, complete cds.
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KW   .
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OS   Mesta yellow vein mosaic virus-associated DNA beta
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded DNA satellites; Betasatellites.
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RN   [1]
RP   1-1354
RA   Chatterjee A., Roy A., Ghosh S.K.;
RT   "First record of a begomovirus associated with yellow vein mosaic disease
RT   of Urena lobata in India";
RL   Australas. Plant Dis. Notes 2(1):27-28(2007).
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RN   [2]
RP   1-1354
RX   DOI; 10.1007/s11262-007-0160-6.
RX   PUBMED; 17763932.
RA   Chatterjee A., Ghosh S.K.;
RT   "Association of a satellite DNA beta molecule with mesta yellow vein mosaic
RT   disease";
RL   Virus Genes 35(3):835-844(2007).
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RN   [3]
RP   1-1354
RA   Chatterjee A., Roy A., Ghosh S.K.;
RT   ;
RL   Submitted (18-NOV-2005) to the INSDC.
RL   Crop Protection, Central Research Institute for Jute and Allied Fibres,
RL   Barrackpore, West Bengal 700120, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1354
FT                   /organism="Mesta yellow vein mosaic virus-associated DNA
FT                   beta"
FT                   /host="Hibiscus sabdariffa L."
FT                   /isolate="Basirhat"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /clone="CRIJAF-Beta10"
FT                   /db_xref="taxon:360580"
FT   gene            complement(194. .550)
FT                   /gene="C1"
FT   CDS             complement(194. .550)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="C1 protein"
FT                   /protein_id="ABC18315.1"
FT                   /translation="MTRSGTNKQGVRFTVDVRIMEDMKIFIHMRLISTKSPALIKYEGI
FT                   IKYTYGDIQVPFDFNGFEGNIIANFLFAYYGANIEEIELEDIVQRLDIIVLENPEILGM
FT                   DVIEPYVFNKKFTV"
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SQ   Sequence 1354 BP; 388 A; 234 C; 325 G; 407 T; 0 other;

dq298137 Length: 1354  23-OCT-2012  Type: N  Check: 1009  ..

       1  accgtgggcg agcggtgccc ggtggccgcg cagtgggtcc cactgcttgt
      51  cttgactgga tttgtcttct aatgggtcaa tttaatgggc ttggaagtga
     101  ttgggccttt gaagatggcc ttttacggat taggggtatg tttgttgttg
     151  gtgatatgtg tgttaaatat gcattgttgg tttgtgtttg aacttaaacg
     201  gtgaacttct tattgaatac gtacggttcg attacatcca ttcccaatat
     251  ctctgggttt tcaagtacaa ttatatctag cctctgaact atgtcttcta
     301  attcgatctc ttctatgttt gccccgtagt atgcgaatag gaaattcgct
     351  atgatattcc cttcaaatcc gttgaaatcg aatggaactt gtatgtctcc
     401  gtacgtgtac ttgatgatcc cttcatactt gatgagcgct ggtgacttgg
     451  tggatattaa cctcatgtga atgaagatct tcatgtcttc catgatgcga
     501  acgtcgactg tgaatctgac tccctgcttg tttgttccgc tccttgtcat
     551  ctctgcttat ttgatggaat tgtttattat gcctgcattt atagacctaa
     601  tgagagatat ttgttgttct tgtgtggttg tgagtgatcc attaatatgt
     651  gactatgcat taaagggtta aagtgatgat ggagatgtat tacatgtgtt
     701  gtgatgtttg ttttaatcct tcatacatgg gtttgtaccg tatatgcctg
     751  tatatacgga tagaaaaagg ataagagaag gaaaaactga actgaaaagg
     801  aaagaccaag aaaataagga aggaagtact aatcaaaaca aataggggag
     851  cgcagcggat cgaaacaaga aacccgaggg aagagaaaaa agaaaaagtt
     901  aaacaaaaaa aaaataaact cgaaaacgtc atcgtttgag aggagggaaa
     951  aaaaaagaaa aaacaaaatt agaaccgaga acgttgtcgt ttgaagatga
    1001  ctggtggttt taccatttac tgggcggtaa atggtaagtg attgaagaag
    1051  ggttaaaaaa tagagactct gataggtaaa ttgatcaccg atatatcggt
    1101  gatcaattgg tgatcaataa tagggattcc ctaaaatacc cccgctttta
    1151  tgtgtaatag gcgcgtcgga gtgcgctgat aaagttaaca ttctctctcc
    1201  taaaatgaga cctaatacaa tttcccgatg atcggagtcg aattttccga
    1251  cacgcgcggc ggtgtgtacc cctgggaggg taggcacctg gtgccactac
    1301  gctacgcagc agccttagct acgccggagc ttagctcgcc cacgctttaa
    1351  tatt