Sequence of DPV Papaya golden mosaic virus

Papaya golden mosaic virus coat protein (AV1) gene, complete cds.

ACC No: DQ318928

Dated: 2007-11-01 | Length: 756 | CRC: -286045490

                
ID   DQ318928; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   DQ318928;
XX
DT   02-DEC-2006 (Rel. 90, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 2)
XX
DE   Papaya golden mosaic virus coat protein (AV1) gene, complete cds.
XX
KW   .
XX
OS   Papaya golden mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
XX
RN   [1]
RP   1-756
RX   PUBMED; 17682933.
RA   Hernandez-Zepeda C., Idris A.M., Carnevali G., Brown J.K.,
RA   Moreno-Valenzuela O.A.;
RT   "Preliminary identification and coat protein gene phylogenetic
RT   relationships of begomoviruses associated with native flora and cultivated
RT   plants from the Yucatan Peninsula of Mexico";
RL   Virus Genes 35(3):825-833(2007).
XX
RN   [2]
RP   1-756
RA   Hernandez-Zepeda C., Idris A.M., Brown J.K., Moreno-Valenzuela O.A.;
RT   ;
RL   Submitted (30-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL   UBBMP, Centro de Investigacion Cientifica de Yucatan, Calle 43 No. 130,
RL   Merida, Yucatan 97200, Mexico
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Papaya golden mosaic virus"
FT                   /segment="DNA-A"
FT                   /specific_host="Carica papaya L."
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Yucatan"
FT                   /clone="pPaGMV302"
FT                   /db_xref="taxon:361698"
FT   gene            1. .756
FT                   /gene="AV1"
FT   CDS             1. .756
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A0SEC5"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:A0SEC5"
FT                   /protein_id="ABC61474.1"
FT                   /translation="MPKRDLPWRSMAGTSKVSRSTNFSPRAGSGPRVNKASEWVNGPMY
FT                   RKPRIYRTLRGPDIPKGCEGPCKVQSFEQRHDISHLGKVLCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVIFWLIRDRRPYGNPMDFGQVFNMFDNEPSTATI
FT                   KNDLRDRYQVLHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYDNHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSIMN"
XX
SQ   Sequence 756 BP; 213 A; 165 C; 185 G; 193 T; 0 other;

dq318928 Length: 756  01-NOV-2007  Type: N  Check: 324  ..

       1  atgcctaagc gggatcttcc atggcgctcg atggcgggaa cctcaaaggt
      51  tagccggtcc actaattttt ctcctcgtgc aggaagtggc ccaagagtta
     101  acaaggcctc ggaatgggtt aacgggccca tgtatagaaa gcccaggatc
     151  tatcgcacat tgcgaggtcc agacatcccc aaaggatgtg aagggccatg
     201  taaggtccag tcatttgagc agcggcatga tatctcccat cttggtaaag
     251  tgttatgtat ttctgatgtg acgcgtggta atggtattac tcatcgcgtc
     301  ggtaagcgtt tttgtgttaa gtctgtatat attttaggca agatatggat
     351  ggacgagaat atcaagttga agaaccatac aaacagcgtt atattctggt
     401  tgatacgaga ccgtagaccg tatggaaatc ccatggattt cggacaagtc
     451  ttcaacatgt tcgacaacga gcctagcact gccaccatca agaacgatct
     501  acgagaccgt taccaagtac ttcaccggtt ctatgcgaaa gtaaccggtg
     551  gacaatatgc tagcaacgaa caggcactcg tgcgccgttt ttggaaggtg
     601  aacaaccatg tggtgtacaa ccaccaggag gcagggaagt atgataacca
     651  tactgagaac gcgttattat tgtatatggc atgtacacat gcctctaatc
     701  ccgtgtatgc aacgcttaag attcgaatct acttctacga ttcgatcatg
     751  aattaa