Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AT10.10 nonfunctional coat protein (p25) gene, complete sequence.
ACC No: DQ355043
Dated: 2010-10-31 | Length: 672 | CRC: 1220690944
ID DQ355043; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC DQ355043; XX DT 14-MAR-2006 (Rel. 87, Created) DT 31-OCT-2010 (Rel. 106, Last updated, Version 2) XX DE Citrus tristeza virus isolate AT10.10 nonfunctional coat protein (p25) DE gene, complete sequence. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX DOI; 10.1094/PHYTO-99-11-1297. RX PUBMED; 19821734. RA Roy A., Brlansky R.H.; RT "Population dynamics of a Florida Citrus tristeza virus isolate and RT aphid-transmitted subisolates: identification of three genotypic groups and RT recombinants after aphid transmission"; RL Phytopathology 99(11):1297-1306(2009). XX RN [2] RP 1-672 RA Roy A., Brlansky R.H.; RT ; RL Submitted (04-JAN-2006) to the EMBL/GenBank/DDBJ databases. RL Plant Pathology, University of Florida, 700, Experimet Station Road, Crec, RL Lake Alfred, FL 33850, USA XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="AT10.10" FT /mol_type="genomic RNA" FT /country="USA" FT /note="genotype: T30; PCR_primers=fwd_name: T36CP (+), FT rev_name: T36CP (-)" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="p25" FT misc_feature 1. .672 FT /gene="p25" FT /note="nonfunctional coat protein due to mutation" XX SQ Sequence 672 BP; 198 A; 122 C; 171 G; 181 T; 0 other; dq355043 Length: 672 31-OCT-2010 Type: N Check: 3706 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgaa gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgatt agcggttaag agttcatcat tgtaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgcgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactgatg tcaggcagct 651 tgggaaattc aacacacgtt ga