Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate T3 nonfunctional coat protein (p25) gene, complete sequence.

ACC No: DQ355053

Dated: 2010-10-31 | Length: 672 | CRC: -1704673792

                
ID   DQ355053; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   DQ355053;
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DT   14-MAR-2006 (Rel. 87, Created)
DT   31-OCT-2010 (Rel. 106, Last updated, Version 2)
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DE   Citrus tristeza virus isolate T3 nonfunctional coat protein (p25) gene,
DE   complete sequence.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RX   DOI; 10.1094/PHYTO-99-11-1297.
RX   PUBMED; 19821734.
RA   Roy A., Brlansky R.H.;
RT   "Population dynamics of a Florida Citrus tristeza virus isolate and
RT   aphid-transmitted subisolates: identification of three genotypic groups and
RT   recombinants after aphid transmission";
RL   Phytopathology 99(11):1297-1306(2009).
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RN   [2]
RP   1-672
RA   Roy A., Brlansky R.H.;
RT   ;
RL   Submitted (04-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, University of Florida, 700, Experimet Station Road, Crec,
RL   Lake Alfred, FL 33850, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="T3"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /note="genotype: T3; PCR_primers=fwd_name: T36CP (+),
FT                   rev_name: T36CP (-)"
FT                   /db_xref="taxon:12162"
FT   gene            1. .672
FT                   /gene="p25"
FT   misc_feature    1. .672
FT                   /gene="p25"
FT                   /note="nonfunctional coat protein due to mutation"
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SQ   Sequence 672 BP; 192 A; 122 C; 177 G; 181 T; 0 other;

dq355053 Length: 672  31-OCT-2010  Type: N  Check: 3310  ..

       1  atggacgacg aaacaaagaa attgaagaac aaaaacaagg agacgaaaga
      51  aggcgacgat gttgttgcag cagagtcttc tttcggttcc gtgaacttac
     101  acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggaacc
     151  taacagaacg ccgctttgaa cagagatttg tttcttactc tgaaagggaa
     201  gtatcctaac ttgtctgaca aggataagga cttccacata gctatgatgt
     251  tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc
     301  acgggcataa catatactcg ggagggtgtt gaagtggaat tgtccgacaa
     351  gctttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta
     401  atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc
     451  tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg
     501  gattccggct ggatatcatt acctatgtgc agatttcttg accggagctg
     551  gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaattg
     601  ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga