Sequence of DPV Cherry small circular viroid-like RNA
Cherry small circular viroid-like RNA 1 isolate cscRNA1.72, complete genome.
ACC No: DQ357619
Dated: 2006-07-21 | Length: 402 | CRC: -1215575888
ID DQ357619; SV 1; circular; genomic RNA; STD; VRL; 402 BP. XX AC DQ357619; XX DT 21-JUL-2006 (Rel. 88, Created) DT 21-JUL-2006 (Rel. 88, Last updated, Version 1) XX DE Cherry small circular viroid-like RNA 1 isolate cscRNA1.72, complete DE genome. XX KW . XX OS Cherry small circular viroid-like RNA 1 OC Viroids; unclassified viroids. XX RN [1] RP 1-402 RX PUBMED; 16514498. RA Di Serio F., Daros J.A., Ragozzino A., Flores R.; RT "Close structural relationship between two hammerhead viroid-like RNAs RT associated with cherry chlorotic rusty spot disease"; RL Arch. Virol. 151(8):1539-1549(2006). XX RN [2] RP 1-402 RA Flores R.; RT ; RL Submitted (10-JAN-2006) to the EMBL/GenBank/DDBJ databases. RL Instituto de Biologia Molecular y Celular de Plantas (UPV-CSIC), RL Universidad Politecnica de Valencia, Avenida de los Naranjos s/n, Valencia, RL Valencia 46022, Spain XX FH Key Location/Qualifiers FH FT source 1. .402 FT /organism="Cherry small circular viroid-like RNA 1" FT /specific_host="cherry tree cultivar Imperiale displaying FT symptoms of cherry chlorotic rusty spot disease" FT /isolate="cscRNA1.72" FT /mol_type="genomic RNA" FT /country="Italy" FT /isolation_source="symptomatic leaves" FT /db_xref="taxon:368620" FT gene join(397. .402,1. .46) FT /gene="RZ+" FT /note="hammerhead ribozyme plus" FT misc_feature join(402,1) FT /gene="RZ+" FT /product="RZ+ self-cleavage site" FT gene complement(246. .296) FT /gene="RZ-" FT /note="hammerhead ribozyme minus" FT misc_feature complement(290. .291) FT /gene="RZ-" FT /product="RZ-self-cleavage site" XX SQ Sequence 402 BP; 115 A; 81 C; 97 G; 109 T; 0 other; dq357619 Length: 402 21-JUL-2006 Type: N Check: 5541 .. 1 gtgggatgta aaatctcacc tgaagaggac aaaagtccga aacggtatgt 51 tagtctttat ttctcgctga aagttttaag tcggaagaag tttcttcctg 101 actgagccag acacggtaga caaaaccttt gctttttccg tattccatag 151 gaacggacgt tatcttttgt aagataacag caggtgcagg tcctgaaatc 201 gtgtggtggc gtgaacttta ggcgaagaaa aggagagtaa acataactat 251 ttcgttcttt tgaactcgtc agtagggaca cacatcccca tatagcggct 301 tggaatacct caggaccgca cctggtagtc accagtacag gtaactcttc 351 gtctaaagga agacggaaag caggttttgc tggtattccc aagcttactg 401 ta